Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1388 ATGGCGACGGCGGGGTTGTATCGGCGCCTTCTTCCTTGCCCCCCCGCCGTCGAGTTTGCTTCCTCACAAGGCAAGCAACTATTTCTTGAATCCATTCAGAATGGAACCATGGAAGGCTTCTACAAGTTGGTTTCCTATTTCCAAACGCAATCCGAGCCCGCCTTTTGCGGCCTCGCTAGCCTGTCCATGGTCCTCAATGCTCTTGCCATTGATCCTGGCAGAAAATGGAAAGGACCTTGGAGATGGTTTGATGAATCTATGTTGGACTGCTGTGAGCCTCTAGAAACAGTCAAGGCTAGAGGCATCACGTTCGGGAAGCTTGTGTGTTTGGCTCATTGTGCCGGAGCAAAAGTTGAAGCCTTTCATGCTACACATAGCAGCATCGATGATTTTCGTAAATATGTCAAGAAATGTTCCATGTCCGATGACTGTCACGTAATCTCATCGTACCACCGAGCTGCCCTCAAACAAACGGGAATTGGCCACTTTTCTCCGATTGGAGGGTATCATGTTGGAAGGGACATGGCACTTATTTTGGACGTTGCACGATTTAAGTATCCTCCCCATTGGATCCCACTTAAACTTCTTTGGGAAGGCATGAATTACATCGATGAGGATACTGGACAATCTAGGGGGTTCATGCTTGTATCAAGGCCTCACAGGGAACCTGGATTGCTTTATACTCTGAGCTGCAAACATGAGAGTTGGATTAATATTGCAAAATTCCTAATGGATGATGTTCCTCTTCTGTTAAAATCAGAGGATGTGAAAGACATCCTTCAGGTTGTTTCAATTATAGCCGCTTCACTGCCATCTAATTTTGAAGAATTCATCAAGTGGATTGCTGAGATCAGGAGGCGAGAGGATGGTGGTCCAAGTTTAAGCGCAGAGGAGAAAGCAAGGCTTGCTATCAAGGAAGAGGTATTGAAACAGGTGCAGGAGACTGGGCTTTTCAAACATGTGGCTTCCTTTTTGTCAAGTTCTTGCAGCAGGCAACAAGTATCAGGTGATGGGGACACGTTACCTATCATTGCTGCAAGTGTTTGTTGCCAAGGAGCAGAAATTTTAGGTGGGAAACCTAGCTCAGCAGGGTATTGCTGTCGAGAAACATGTCTGAAATGCTTGAAAGCTGAAGATGACAAGCCAATAACAATGGTTTCAGGGACTGTGGTAAATGGTAACAGCGAGCAAGGGGTTGATGTTTTGATTCCTTCATCATCTGAGAAATTATGTTGCATTTGCTCTAAAAGTAAGTACATAAGGGTGCACCCAGCTAGCACTGATGTGCTAACAGTGCTTCTGCTGTCCTTACCATCTACAACTTGGGCTGGCATCACAGATGAGCAGCTTTTGGCCGAAATACACGATCTTGTTTCAATTGAAAATCTTCCTACTTTGCTTCAGGAAGAGGTTCTGCACTTGAGACGTCAGCTACACCTTCTCAAGAGATGTCAAGAGGGTAAGGTAGACGAGGATCTTGGTGCTCCTCTCTCTTGA 1497 0.4582 MATAGLYRRLLPCPPAVEFASSQGKQLFLESIQNGTMEGFYKLVSYFQTQSEPAFCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLETVKARGITFGKLVCLAHCAGAKVEAFHATHSSIDDFRKYVKKCSMSDDCHVISSYHRAALKQTGIGHFSPIGGYHVGRDMALILDVARFKYPPHWIPLKLLWEGMNYIDEDTGQSRGFMLVSRPHREPGLLYTLSCKHESWINIAKFLMDDVPLLLKSEDVKDILQVVSIIAASLPSNFEEFIKWIAEIRRREDGGPSLSAEEKARLAIKEEVLKQVQETGLFKHVASFLSSSCSRQQVSGDGDTLPIIAASVCCQGAEILGGKPSSAGYCCRETCLKCLKAEDDKPITMVSGTVVNGNSEQGVDVLIPSSSEKLCCICSKSKYIRVHPASTDVLTVLLLSLPSTTWAGITDEQLLAEIHDLVSIENLPTLLQEEVLHLRRQLHLLKRCQEGKVDEDLGAPLS* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1388 498 Pfam Domain of unknown function (DUF1984) 231 478 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Gso3g1388 498 Gene3D - 16 220 IPR038156 -
Gso3g1388 498 PANTHER BNAA02G22480D PROTEIN 1 496 - -
Gso3g1388 498 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 1 496 IPR040409 GO:0016756|GO:0046872|GO:0046938
Gso3g1388 498 SUPERFAMILY Cysteine proteinases 14 217 IPR038765 -
Gso3g1388 498 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Gso3g1388 498 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1388 Gso-Chr3 39841087 39844549 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1388 K05941 - gmx:547627 990.719