Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1383 ATGTATCTTCAGTTTTACATAAACGATAACGGCGACAAAGTCTACACCACTAAGAAAGAGTCGCCGGTAGGGCTACCTACACAATCTGCTCATCCAGCCCGGTTTTCACCCGATGATAAATATTCAAGACAGAGAGTTCTTCTGAAGAAGCGTTTTGGATTATTACCAACCCAGCAGCCACCTCCAAAGTATTGA 195 0.4359 MYLQFYINDNGDKVYTTKKESPVGLPTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY* 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1383 64 SUPERFAMILY Nop10-like SnoRNP 3 58 IPR036756 GO:0001522|GO:0030515|GO:0042254
Gso3g1383 64 PANTHER RIBOSOME BIOGENESIS PROTEIN NOP10 1 64 IPR007264 GO:0001522|GO:0030515|GO:0042254
Gso3g1383 64 MobiDBLite consensus disorder prediction 16 40 - -
Gso3g1383 64 Pfam Nucleolar RNA-binding protein, Nop10p family 3 52 IPR007264 GO:0001522|GO:0030515|GO:0042254
Gso3g1383 64 Gene3D H/ACA ribonucleoprotein complex, subunit Nop10 10 54 - -
Gso3g1383 64 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 3-LIKE PROTEIN 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1383 Gso-Chr3 39804769 39806996 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1383 K11130 - gmx:100306376 137.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1378 19 42616090 42618199 Gso3g1383 3 39804769 39806996 GST