Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1355 ATGGAGAAGTTCCTGTGCGAGTTGTTGCTGGATTCCTCGCAGCCAATTTCCGAGCGTTTCAGAGCGCTCTTCTCTCTCCGCAACCTCAAAGGCCCCGTCCCTCGCAACGCCCTTATTTGCGCCACAAGGGATTCGTCGAATTTGTTGGCGCACGAAGCTGCATTTGCGTTGGGTCAAATGCAGGATTTGGAAGCCATCCCTGCTTTGGCCTCAGTTCTCAATGATCTTTCTTTGCATCCCATTGTTCGCCATGAGGCAGCTGAGGCTCTGGGTGCTATTGGTTCAGATGGTAATGTTCCTTTCCTGAAAAGTAGTTTGGATTTGGATCCAGCCGAGGAGGTTCGAGAAACGTGTGAATTAGCCCTTCAACGAATTCAGAATTTAAAAGATGCTGGTAATACTGATGAATTGTCTGCAAATGGTGTATCTCCTTTTAAGTCTGTTGATCCAGCTGCACCAGCGATCTCTGGTTCTTCTGTTGATCAACTAAGGCAAGTGCTTCTTGATGAAGAAAAAGGGATGTATGAGCGCTATGCAGCTCTTTTTGCACTTCGAAATGATGGTGGAAATGAAGCTGTTACCGCTATCATTGATTCCTTGGGCTCAAAAAGTGCTCTACTGCGCCATGAGGTTGCATATGTTTTGGGTCAATTGCAAGACAAAGCTGCTTCAGCTGCTCTATCCAATATACTTAAAGATGTGAATGAGCATCCAATGGTTAGGCATGAGGCTGCTGAAGCTCTTGGTTCAATTGCAGATGACCAATGTGTAGCCCTTCTTGAGGAGTTTTCGGCAGATCCAGAGCCTCTTGTCTCACAAAGTTGTCAAGTTGCTCTAAGCATGCTAGAATTTGAACGATCAGGGAAATCATTCGAGTTCCTGTTCATGCGCACTCCAACTGTGCATTAA 909 0.462 MEKFLCELLLDSSQPISERFRALFSLRNLKGPVPRNALICATRDSSNLLAHEAAFALGQMQDLEAIPALASVLNDLSLHPIVRHEAAEALGAIGSDGNVPFLKSSLDLDPAEEVRETCELALQRIQNLKDAGNTDELSANGVSPFKSVDPAAPAISGSSVDQLRQVLLDEEKGMYERYAALFALRNDGGNEAVTAIIDSLGSKSALLRHEVAYVLGQLQDKAASAALSNILKDVNEHPMVRHEAAEALGSIADDQCVALLEEFSADPEPLVSQSCQVALSMLEFERSGKSFEFLFMRTPTVH* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1355 302 Hamap Deoxyhypusine hydroxylase [DOHH]. 2 292 IPR027517 GO:0008612|GO:0019135
Gso3g1355 302 PANTHER PBS LYASE HEAT-LIKE PROTEIN 7 288 - -
Gso3g1355 302 PANTHER DEOXYHYPUSINE HYDROXYLASE 7 288 - -
Gso3g1355 302 Pfam HEAT repeats 40 122 - -
Gso3g1355 302 Gene3D - 145 291 IPR011989 -
Gso3g1355 302 Gene3D - 3 142 IPR011989 -
Gso3g1355 302 SUPERFAMILY ARM repeat 48 281 IPR016024 -
Gso3g1355 302 Pfam PBS lyase HEAT-like repeat 207 233 IPR004155 -
Gso3g1355 302 Pfam PBS lyase HEAT-like repeat 240 266 IPR004155 -
Gso3g1355 302 Coils Coil 111 131 - -
Gso3g1355 302 SMART E-Z type HEAT repeats 238 267 IPR004155 -
Gso3g1355 302 SMART E-Z type HEAT repeats 174 203 IPR004155 -
Gso3g1355 302 SMART E-Z type HEAT repeats 205 234 IPR004155 -
Gso3g1355 302 SMART E-Z type HEAT repeats 80 109 IPR004155 -
Gso3g1355 302 SMART E-Z type HEAT repeats 16 45 IPR004155 -
Gso3g1355 302 SMART E-Z type HEAT repeats 47 76 IPR004155 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1355 Gso-Chr3 39472549 39476774 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1355 K06072 - gmx:100815364 583.563