Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1314 ATGTCTGGACTGATTGAAAGACTTCCTGATGCTGTTGCAATTAGGTGCCTTGCACGTGTTCCCTTCTACTTTCACCCAGTGTTAGAGCTTGTCTCTCGTTCTTGGCAAGCAGCTATTCGTAGCCCTGAACTATTTAAAGCTCGGCAGGAGGTTGGTTCAACTGAGGATCTGTTATGTGTCTGTGCTTTTGATCCAGAGAACTTATGGCAGTTGTATGACCCTATGCGAGATCTCTGGATTACACTCCCTGTTCTTCCCTCAAAGATCAGGCACCTTTCCAACTTTGGTGCTGTTTCCACTGCTGGAAAGTTGTTTGTGATTGGTGGTGGAAGTGATGCTGTTGATCCTTTGACTGGTGACCAAGATGGTTGTTTTGCAACAGATGAAGTTTGGTCATATGACCCTGTAGTCCGGCAGTGGGCCCCTCGTGCGTCAATGCTTGTTCCCCGTTCTATGTTTGCATGCTGCGTTTTGAATGGAAAAATTGTTGTGGCTGGGGGCTTCACTAGCTGCAGAAAATCAATATCTCAAGCAGAAATGTATGATCCTGACAAGGATGTTTGGATTCCAATGCCTGATCTTCATCGCACTCATAATTCAGCCTGTTCGGGGGTAGTGATTGGTGGGAAGGTGCATGTACTGCACAAGGATTTGTCAACAGTGCAAGTTTTAGACAATGCAGGGCCCGGTTGGACCGTTGAGGAATGCGTGTGGCTCCAAGGGCAGATGGCAGTTGTCGGCGATGCACTTTATGTAATGAGCCATGGATTAATCTTCAAGCAGGACAAAGAAGTGAGAAAGGTTGTAGGTTCAGCATCCGAGTTTCGAAAGAGAATTGGCTTTGCAATGACTGGACTAGGTGATGACTTATACGTGATTGGAGGCTTCATTGGACCAGATAGATGGAATTGGGACATTAAGCCATTATCCGAAGTTGATGTTCTCACACTTGGAAGTGAGAGACCAACTTGGCGCCAAGCAGCTCCGATGACACGGTGTCATGGTCCTATTCTTGGTTGTACGCTGCTGAGAATTTAG 1038 0.4672 MSGLIERLPDAVAIRCLARVPFYFHPVLELVSRSWQAAIRSPELFKARQEVGSTEDLLCVCAFDPENLWQLYDPMRDLWITLPVLPSKIRHLSNFGAVSTAGKLFVIGGGSDAVDPLTGDQDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKSISQAEMYDPDKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDLSTVQVLDNAGPGWTVEECVWLQGQMAVVGDALYVMSHGLIFKQDKEVRKVVGSASEFRKRIGFAMTGLGDDLYVIGGFIGPDRWNWDIKPLSEVDVLTLGSERPTWRQAAPMTRCHGPILGCTLLRI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1314 345 SUPERFAMILY F-box domain 4 47 IPR036047 GO:0005515
Gso3g1314 345 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP30 2 345 - -
Gso3g1314 345 Pfam F-box domain 6 45 IPR001810 GO:0005515
Gso3g1314 345 Pfam Kelch motif 149 194 IPR006652 GO:0005515
Gso3g1314 345 Pfam Kelch motif 278 330 IPR006652 GO:0005515
Gso3g1314 345 Pfam Kelch motif 92 146 IPR006652 GO:0005515
Gso3g1314 345 Gene3D - 61 342 IPR015915 GO:0005515
Gso3g1314 345 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 2 345 - -
Gso3g1314 345 SMART kelc_smart 161 208 IPR006652 GO:0005515
Gso3g1314 345 SMART kelc_smart 103 160 IPR006652 GO:0005515
Gso3g1314 345 SMART kelc_smart 289 344 IPR006652 GO:0005515
Gso3g1314 345 SUPERFAMILY Kelch motif 61 332 IPR015915 GO:0005515
Gso3g1314 345 SMART fbox_2 8 48 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1314 Gso-Chr3 38984963 38989858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1314 8 188 Miscellaneous Gene Families AT4G33900 30.000 2.45e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1314 - - gmx:100800954 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1312 19 41811952 41817921 Gso3g1314 3 38984963 38989858 GST