Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1312 ATGCTGCTGAGGAACAGATCAAGGGCAGTGACAAAGCCAGGTTTGATGGCTGATCACAGCACCCAGAATTCTTCTCCCAATCAAAACTATGCTAAAACCATTATACCCTCTCTATTTGGGTCACCAAAATTCAGAGATTTCACCAACAAGTGTCTCTCTTCAGGAACTGAGGCCTTAAGGAGCCCAACTTCAATTCTTGATGCCAGAGCATTATCCCCTTTTGCCTTTGGAAGCCCATTCTCAACCCTTCCAAACAAAAGCTCCTCACAAAACAGAACCTGGGACAAACCTGATTCAAAAGGGGGCATTGGTCTTGCTCTTGTTGGTGCTCTCAAAGATGAAGATACCTCAATTAGTCACAATTCTGAACCCAACAAAGGAAATGTTTTGCTTAGAGTGAAAATCCCGTTTGAGTCTCAATTTCAAACATGTGTAGATGATTTTGGAACCACCAAAACCAATAATGGTTCAAAGAACTCATCAGGGTCAGGAATTTGTGCAAAGGATTGTTGTGATTCTCCAAGAAGTGGTGGCGTTCTGTCTTGGAGTGAGATGGAGCTTTCTGAAGAATATACATGTGTGATATCCCATGGACCTAACCCAAAAGCCACACACATATTCAACAATTGCATTGTGGTGGAGACCTATTGTTCTCTCCCCCAAAAACATAACTCTCATCACTCTGCTGCTACCTCCGGGAATTTCCTCAGCTTCTGCTACACTTGCAAGAAACATCTTGACCAGACAAAGGACATCTTTATTTATAGAGGAGAGAAAGCTTTCTGTAGCAGGGAATGCCGCCACAGAGAAATGATGTTAGATGGGATAGAAAATCTAGAGTTTGAAAATTGA 852 0.4237 MLLRNRSRAVTKPGLMADHSTQNSSPNQNYAKTIIPSLFGSPKFRDFTNKCLSSGTEALRSPTSILDARALSPFAFGSPFSTLPNKSSSQNRTWDKPDSKGGIGLALVGALKDEDTSISHNSEPNKGNVLLRVKIPFESQFQTCVDDFGTTKTNNGSKNSSGSGICAKDCCDSPRSGGVLSWSEMELSEEYTCVISHGPNPKATHIFNNCIVVETYCSLPQKHNSHHSAATSGNFLSFCYTCKKHLDQTKDIFIYRGEKAFCSRECRHREMMLDGIENLEFEN* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1312 283 ProSiteProfiles Zinc finger FLZ-type profile. 234 278 IPR007650 -
Gso3g1312 283 PANTHER ZF-FLZ DOMAIN-CONTAINING PROTEIN-RELATED 2 278 - -
Gso3g1312 283 PANTHER FCS-LIKE ZINC FINGER 8 2 278 IPR044593 -
Gso3g1312 283 Pfam zinc-finger of the FCS-type, C2-C2 227 274 IPR007650 -
Gso3g1312 283 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1312 Gso-Chr3 38967826 38970204 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1312 - - gmx:100800416 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1310 19 41792407 41794757 Gso3g1312 3 38967826 38970204 GST
Gso3g1312 3 38967826 38970204 Gso2g1209 2 15085959 15087762 PCT
Gso3g1312 3 38967826 38970204 Gso10g0243 10 2507752 2509529 PCT
Gso2g1209 2 15085959 15087762 Gso3g1312 3 38967826 38970204 PCT
Gso10g0243 10 2507752 2509529 Gso3g1312 3 38967826 38970204 PCT