Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1300 ATGAGTTATGCATTGGATGTGCCATGGTATGCCAGCTTACCCAGACTGGAGACAAGATTTTACCTTGAACAATATGGTGGTAGCAGTGACGTTTGGATTGGCAAGACCCTTTACAGGATGCCTTACGTGAACAATGATGTTTATCTCGAGCTTGCAAAATTGGATTACAACAACTGTCAAGCAGTGCATTGTGCGGAATGGGAAAAAATTCAAAGGTGGTACTCTGAAGCAGGACTAGAGGAGTTTGGGTTGAGCAAAGAAAGTCTCCTATCTGCTTACTTTATAGCAGCAGCCAGCATATTTGAGCCTGAGAGATCTCCAGAGCGACTTGCATGGGCTAAAACCGCAGCATTGCTCGAGACACTGAGATCCTTCATAAAGGATGAAGAAACTAAGAGTGCTTTTGTAGATTTGTTCAACAACAGCATTAACGGACCAGACCACTCAAACAAGCAGTTGAACAAGAGAGAGAAGGAACTCTTGGAGATTTTGCTGAGAAACCTTGATTACCTTGGGTTCGAAATGTTTCGGTGTCATGGTCAGGAATTTTCTCATTATTTGAATCAAGCATGGCATGGTTGGCTATCAAGTTGGAAAAATGAAGGAACCTGCTTTGGAAGAGAAGCTGAGCTGATTGTGCAAATCATAAATGTAATTGCTGGCTATTGGTCAGGAGAACTATATCTCAATCCACAGTACCAGAGGTTGCTGGAGGCACATGATAGTGGCAACGACAACCTGAGTAGAACCAGCATCACTACTCCTCAAATAGAATCAGATATGCAAGAACTTGTGCAATTGGTGCTCCAAAATTCCTCAGATGGCGTGCACACCAATGTGAAGAATTCATTCCTCACAGTGGCCAAGGGCTTTTACTATGGCTCATATTGTGACCCAGAGACCATAAACTCTCATATTGAGAAAGTGCTCTTTCAAAAAGTCATGTAA 948 0.4272 MSYALDVPWYASLPRLETRFYLEQYGGSSDVWIGKTLYRMPYVNNDVYLELAKLDYNNCQAVHCAEWEKIQRWYSEAGLEEFGLSKESLLSAYFIAAASIFEPERSPERLAWAKTAALLETLRSFIKDEETKSAFVDLFNNSINGPDHSNKQLNKREKELLEILLRNLDYLGFEMFRCHGQEFSHYLNQAWHGWLSSWKNEGTCFGREAELIVQIINVIAGYWSGELYLNPQYQRLLEAHDSGNDNLSRTSITTPQIESDMQELVQLVLQNSSDGVHTNVKNSFLTVAKGFYYGSYCDPETINSHIEKVLFQKVM* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1300 315 SUPERFAMILY Terpenoid synthases 44 201 IPR008949 -
Gso3g1300 315 Gene3D Farnesyl Diphosphate Synthase 59 315 IPR008949 -
Gso3g1300 315 Gene3D - 2 57 IPR036965 GO:0010333|GO:0016829
Gso3g1300 315 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 2 313 - -
Gso3g1300 315 Pfam Terpene synthase family, metal binding domain 49 201 IPR005630 GO:0000287|GO:0010333|GO:0016829
Gso3g1300 315 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 2 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1300 Gso-Chr3 38815679 38818898 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1300 K04120 - gsj:114405254 632.484