Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso3g1275 | ATGTTGTTCTTCTCGTACTTCAAGGATTTGGTGGGGAGGGAAGTAATCGTGGAGCTGAAGAACGATTTGGCCATCAAAGGGACGTTGCATTCTGTTGATCAGTACCTCAACATCAAGCTCGAAAACACTAGCGTCGTCAATCAAGAAAAGTACCCTCACATGCTTTCTGTAAGGAACTGCTTCATCAGAGGTTCGGTAGTGAGATATGTGCAATTGCCTCCAGAAGGTGTGGACATTGAATTATTGCACGATGCCACAAGAAGAGAAGCTCGGGGCGGTTAA | 282 | 0.4574 | MLFFSYFKDLVGREVIVELKNDLAIKGTLHSVDQYLNIKLENTSVVNQEKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG* | 94 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso3g1275 | 93 | CDD | LSm2 | 2 | 90 | IPR016654 | GO:0006397 | |
| Gso3g1275 | 93 | Gene3D | - | 1 | 92 | - | - | |
| Gso3g1275 | 93 | SUPERFAMILY | Sm-like ribonucleoproteins | 3 | 92 | IPR010920 | - | |
| Gso3g1275 | 93 | PIRSF | Lsm2 | 1 | 93 | IPR016654 | GO:0006397 | |
| Gso3g1275 | 93 | Pfam | LSM domain | 7 | 71 | IPR001163 | - | |
| Gso3g1275 | 93 | SMART | Sm3 | 5 | 72 | IPR001163 | - | |
| Gso3g1275 | 93 | PANTHER | SNRNP CORE PROTEIN FAMILY MEMBER | 1 | 91 | IPR016654 | GO:0006397 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso3g1275 | Gso-Chr3 | 38452736 | 38455150 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso3g1275 | K12621 | - | gmx:102665888 | 188.348 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso19g1275 | 19 | 41298170 | 41299948 | Gso3g1275 | 3 | 38452736 | 38455150 | GST |