Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1268 ATGAATTTCTTCACCTCCTTTTTCTCCGACGACGACGACGACGACGACAATGCTCGCCAAACCGAATCGCAAGACGAAGAAGAAGCGAGTCGCGATTCCGAGCACCTATCCGATTCCCCCACCAGCGACGGCGGCGCGTGGGAATTCAGCGGCCTATGGAAAACCCTAAGCGCGAAATCGGAATCCATCATCGATACCTACCGTCGCGACCTGCAGGAATTCGGCACCGGTTTGAAGAAGGAGATTGAGGTCGCTCACGGTTCCCTCGAGACGGTGGGCCACGTCATCGACCAGTTCGGAAACACAGTCGTCAAAGGCACCTCTCACATCAAATCATATCTCGATTCCGATAATAATAACAGAAACAACAACCCCGGCGGCAACGAAGAAAAAAAGAGTTTCAATTCGAAGCGCTATTATAATAGGTTTGACGCACAGGTTCGTGCAATTCAGGGTGACGTTAGCACCTACACCGAAGTGCCTGAGGATTCGGATGAGTATACTGATTGGAAATCAGGGTTTTCGTTGGAAGGGAAGAGTGATGAAATTGAGGATTTTTTAAAAGAGAGTGAGGCGATGGAGAGTGTTTTCAAGAGGGTTGTTCCCAGTGTTGTTGACCGTGACACGTTTTGGTGTAGGTATTATTATAGAGTTTATAGGCTCAAGAAAGCTGAGGATGTGAGGGCGAGACTCGTGAGGAGAATGTCGAGGGAAGAGGAGGAGTTGAGTTGGGATGTTGAAGATGATGATGATGATGGTGATGGGGATGAGAATAAGGGGAAAGAGGGAGATTCTGAGTTGCATGGTGATGGAACAAAGAAATTGAATGTGGAAGAGATGCATAAGTCTGGTGAGGAGGGGTCTAAGGAAGAAAAGAGAGGTGATTTATTGCAAAGCAAGGGAGATGAGTGTGTCGAAGAATCAAAGGTTGACAAGAACAAAGAGGTTGTTGAGAAGATGGGTGATGGAAGTAGTAAGAAAACTATCAATGAAGATGATGAGAGGAAAGATTCTGGTGTGGATTCTGGTAAGAAAGTGATAATGGAAAGTAAAGTTGATGATGGAAAAGATTCGTTGGTTGCAAATAAGCACTCGGGGAACAAGAAAGAGGAGGAGGATCTTGAGTGGGATGAAATTGAGAATCTTAGTAGAATTGATGAAGAGAAGGAAGTTCGGACGGGTAGCCCTACCAAAGTTGATTTGCGGAAGCGCCTCAGTGCTGCTCAAGAGCAAGACGAAGAAGACGACTTGAGTTGGGACATTGAAGATGATGATGAACATGCTAAGGCATGA 1293 0.4625 MNFFTSFFSDDDDDDDNARQTESQDEEEASRDSEHLSDSPTSDGGAWEFSGLWKTLSAKSESIIDTYRRDLQEFGTGLKKEIEVAHGSLETVGHVIDQFGNTVVKGTSHIKSYLDSDNNNRNNNPGGNEEKKSFNSKRYYNRFDAQVRAIQGDVSTYTEVPEDSDEYTDWKSGFSLEGKSDEIEDFLKESEAMESVFKRVVPSVVDRDTFWCRYYYRVYRLKKAEDVRARLVRRMSREEEELSWDVEDDDDDGDGDENKGKEGDSELHGDGTKKLNVEEMHKSGEEGSKEEKRGDLLQSKGDECVEESKVDKNKEVVEKMGDGSSKKTINEDDERKDSGVDSGKKVIMESKVDDGKDSLVANKHSGNKKEEEDLEWDEIENLSRIDEEKEVRTGSPTKVDLRKRLSAAQEQDEEDDLSWDIEDDDEHAKA* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1268 430 SUPERFAMILY BSD domain-like 139 227 IPR035925 -
Gso3g1268 430 ProSiteProfiles BSD domain profile. 170 222 IPR005607 -
Gso3g1268 430 MobiDBLite consensus disorder prediction 112 133 - -
Gso3g1268 430 Pfam BSD domain 170 226 IPR005607 -
Gso3g1268 430 PANTHER SYNAPSE-ASSOCIATED PROTEIN 84 424 - -
Gso3g1268 430 PANTHER SYNAPSE-ASSOCIATED PROTEIN 1 84 - -
Gso3g1268 430 MobiDBLite consensus disorder prediction 382 411 - -
Gso3g1268 430 MobiDBLite consensus disorder prediction 8 22 - -
Gso3g1268 430 PANTHER PROTEIN, PUTATIVE-RELATED 84 424 - -
Gso3g1268 430 PANTHER PROTEIN, PUTATIVE-RELATED 1 84 - -
Gso3g1268 430 Gene3D BSD domain 132 231 IPR035925 -
Gso3g1268 430 MobiDBLite consensus disorder prediction 258 372 - -
Gso3g1268 430 MobiDBLite consensus disorder prediction 1 46 - -
Gso3g1268 430 MobiDBLite consensus disorder prediction 239 430 - -
Gso3g1268 430 MobiDBLite consensus disorder prediction 23 38 - -
Gso3g1268 430 MobiDBLite consensus disorder prediction 242 257 - -
Gso3g1268 430 SMART wurzfinal6 170 222 IPR005607 -
Gso3g1268 430 Coils Coil 221 241 - -
Gso3g1268 430 MobiDBLite consensus disorder prediction 112 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1268 Gso-Chr3 38363019 38364679 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1268 - - gmx:102665065 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1268 3 38363019 38364679 Gso2g1242 2 15432236 15434036 PCT
Gso3g1268 3 38363019 38364679 Gso10g0209 10 2176676 2178326 PCT
Gso2g1242 2 15432236 15434036 Gso3g1268 3 38363019 38364679 PCT
Gso10g0209 10 2176676 2178326 Gso3g1268 3 38363019 38364679 PCT