Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1265 ATGATGACAGACGAGGAATTGTTGCAGAAACTTGAAGACTTAACCAAAAACGCCCAACACCACCACTTGGAGACTCTCCGCTCGATCCTTCTTCACAATGGAATCGTGCACTATCTTCAATCCTTCAAGAAGGGTTCTCTTCTTCATCTTGATCCATCAACTTTCGCACGTGTCGTGCCCTTGTCCACGTATGAGGACTACGTTGACTACATTAACCAGATGGCAGAAGGGAAAGATGACCCTTTTCTCTCCGTTGACCCTCTCCGCTGCTTCTTTTACAGCTCGGGAACAAGTTCAAGCACCATGAAACCGAAATTGATCCCTTACTTTGATTCAAGCCTTTCCAAAGCTGCCTCCTTTATTGGTCACCGAGGCAGTGTTGCTGTTCGTCAAAGGCTATTTCCTCCAAGGCCAGAAGTGAACAAGATCCTATGGTTTCTCTATGCTGACAACATTACTACCACTAAATGTGGCTTGAAAGTCATGGCTGCATCTACATACCCTTTGCAAAGTGGTAATGCTACCCCTCAACAACTTGCTGCCTTTTCCAGTCCCCTAGAAGTGATTCTTGCCACTAATGTTGAGAATCAAATGTACTGCCACCTTCTATGTGGCCTTAGGAATCTTGACCTTATAGATGGAATTGCAACCCCTTATGCTATAGGCTTGATTAAAGCATTTGGTTTTTTGGAGTCCAAGTGGGAGCAGCTATGTGATGATCTTGACCATGGATTTCCATGTAATGAAATTTCTGAGGGGGCAATGAGGGAAGCTGTGACCAACACACTTGGTGGACCTCAGCCAGAATTGGCAAATAGAATAAGGTTAATCTGTGAAGGTAATAACTGGGGCGGAATTGTGTATAGATTGTGGCCAAACATTCGTTATATTAGGTGTGTTACCACTGGAAGCATGAAGCAGTACTACCAAAAGCTCAAGTATTATGCAGGAGAGGTACCTATTTTAGGAGGAGATTATTTTGCTTCAGAGTGCTGTGTTGGTCTAAATTTAGACATAATGCAACCCCCTGAGACAACACGGTTTGTGATGCTTCCAACTTTTGCCTACTTTGAGTTTCTTCCATTTAACATAAATGAGGACAATGATGCTAGCAAGGAAGCTGTGGACTATAGCAGTGTAGAGGTTGGCAAGATGTATGAAGTGGTTGTTACTACTTACAGAGGATATTACCGATACCGTTTGGGCGATATAGTGAGAGTTGTTGGTTTCTATAATTCATCTCCACTAGTAGAGTATGTGATGAGAGCACCTAAAACTCCTGCTGAGATTGTGACTGAGAAGGACTTGATTTCAGCAGTTGAAAATTTTCAACTTGCACTTAGAGGTGCTATGAGAATTGAGATTGTTGAGTTTGCAAGTTTCTTGGACCAGGAGTCAATGCCGAAGCAGTTGAAGGTATTTGTGGAAGTCCAAGAGGAATCTGATTTTCTGGAGGATAAGCTAGAGGAATCAGTTAGAGTTTTGAGAAGTTGTATCTCCTCTCTTGAGAGTGGGTTGGGAGCTATATACAAGGTGCAGAAGGATAAAGGTCAACTAAGGAGCTTACGGATATTCATCATAAGGCCTGGAGCTTTTGATCAGTTATCAGAATTAGCCATTAAAAATGGAACATCAGCTAGTCAATATAAACCACCCAAGATCATAAGGAATCATGAAGTTGTCAAACTCTTGGAAAAATTAGCCTTTGTGGCAGTATCATTCGATGGCTAA 1731 0.4235 MMTDEELLQKLEDLTKNAQHHHLETLRSILLHNGIVHYLQSFKKGSLLHLDPSTFARVVPLSTYEDYVDYINQMAEGKDDPFLSVDPLRCFFYSSGTSSSTMKPKLIPYFDSSLSKAASFIGHRGSVAVRQRLFPPRPEVNKILWFLYADNITTTKCGLKVMAASTYPLQSGNATPQQLAAFSSPLEVILATNVENQMYCHLLCGLRNLDLIDGIATPYAIGLIKAFGFLESKWEQLCDDLDHGFPCNEISEGAMREAVTNTLGGPQPELANRIRLICEGNNWGGIVYRLWPNIRYIRCVTTGSMKQYYQKLKYYAGEVPILGGDYFASECCVGLNLDIMQPPETTRFVMLPTFAYFEFLPFNINEDNDASKEAVDYSSVEVGKMYEVVVTTYRGYYRYRLGDIVRVVGFYNSSPLVEYVMRAPKTPAEIVTEKDLISAVENFQLALRGAMRIEIVEFASFLDQESMPKQLKVFVEVQEESDFLEDKLEESVRVLRSCISSLESGLGAIYKVQKDKGQLRSLRIFIIRPGAFDQLSELAIKNGTSASQYKPPKIIRNHEVVKLLEKLAFVAVSFDG* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1265 576 Pfam GH3 auxin-responsive promoter 10 558 IPR004993 -
Gso3g1265 576 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 2 572 IPR004993 -
Gso3g1265 576 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.6-RELATED 2 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1265 Gso-Chr3 38344404 38347948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1265 8 566 EF-hand Containing Proteins AT1G23160 32.337 7.25e-94 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1265 K14487 - gmx:100786829 1146.72