Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1224 ATGGGGGCGGGTGGCCGAACTGATGTTCCTCCTGCCAACAGGAAGTCAGAGGTTGACCCTTTGAAGCGGGTGCCATTTGAAAAACCTCCATTTAGTCTCAGCCAAATCAAGAAGGTCATTCCACCTCACTGTTTTCAGCGTTCTGTTTTCCGCTCATTCTCCTATGTTGTTTACGACCTCACCATAGCCTTCTGCCTCTATTATGTTGCCACCCATTACTTCCACCTCCTTCCCAGCCCTCTCTCTTTCTTGGCATGGCCAATCTACTGGGCTGTCCAAGGTTGCATCCTTACTGGAGTTTGGGTCATTGCCCATGAGTGTGGCCACCATGCATTCAGTGACTACCAGTTGCTTGATGATATTGTTGGCCTTGTCCTCCACTCCGGTCTCCTAGTCCCATACTTTTCATGGAAATACAGCCATCGCCGTCACCACTCCAACACTGGTTCTCTTGAGCGGGATGAAGTATTTGTGCCAAAGCAGAAGTCCTGTATCAAGTGGTACTCTAAATACCTTAACAATCCTCCAGGCAGAGTCCTCACTCTTGCTGTCACCCTCACACTTGGTTGGCCCTTGTACTTGGCTTTAAATGTTTCTGGAAGGCCTTATGATAGATTTGCTTGCCACTATGACCCATATGGTCCCATTTACTCTGATCGTGAACGACTTCAAATATATATATCAGATGCAGGAGTACTTGCAGTATGCTATGGCCTTTTCCGTCTTGCCATGGCAAAAGGACTTGCCTGGGTGGTGTGTGTTTATGGAGTTCCATTGCTAGTGGTCAATGGATTTTTGGTGTTGATTACATTCTTGCAGCATACTCACCCTGCATTGCCACATTACACTTCCTCTGAGTGGGACTGGTTGAGAGGAGCTTTAGCAACAGTGGATAGAGATTATGGAATCCTGAACAAGGTCTTCCATAATATTACAGACACTCATGTAGCACATCACTTGTTCTCCACAATGCCACATTATCATGCAATGGAGGCTACAAAGGCAATAAAACCCATTTTGGGAGAGTATTATCGGTTTGATGAGACTCCATTTGTCAAGGCAATGTGGAGAGAGGCAAGAGAGTGTATTTATGTGGAGCCAGATCAAAGTACCGAGAGCAAAGGTGTATTTTGGTACAACAATAAGTTGTGA 1152 0.4601 MGAGGRTDVPPANRKSEVDPLKRVPFEKPPFSLSQIKKVIPPHCFQRSVFRSFSYVVYDLTIAFCLYYVATHYFHLLPSPLSFLAWPIYWAVQGCILTGVWVIAHECGHHAFSDYQLLDDIVGLVLHSGLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSCIKWYSKYLNNPPGRVLTLAVTLTLGWPLYLALNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVCYGLFRLAMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYTSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYRFDETPFVKAMWREARECIYVEPDQSTESKGVFWYNNKL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1224 383 CDD Delta12-FADS-like 47 329 - -
Gso3g1224 383 PANTHER OLEATE HYDROXYLASE FAH12 1 383 - -
Gso3g1224 383 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 1 383 - -
Gso3g1224 383 Pfam Domain of unknown function (DUF3474) 28 66 IPR021863 GO:0016717
Gso3g1224 383 Pfam Fatty acid desaturase 85 344 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1224 Gso-Chr3 37892385 37898590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1224 1 383 Lipid Metabolism Gene Families AT3G12120 77.285 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1224 K10256 - gmx:547815 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1224 3 37892385 37898590 Gso3g1224 3 37892385 37898590 ECH
Gso19g1224 19 40747414 40752160 Gso3g1224 3 37892385 37898590 GST