Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1223 ATGCAGGGAGGAAAGAAAGCTGGAGAGTCCATCAAGGAAACAGCTGCAAACATTGGTGCTTCTGCCAAGGCTGGCATGGAGAAAACCAAGGCCACTGTCCAGGAGAAGGCAGAAAGAATGACGGCACGTGATCCGATGCAAAAGGAGTTGGCAACCCAGAAGAAAGAGGCAAAGATGAGCCAGGCAGAGCTGGACAAGCAGGCGGCGCGTCAGCATAACACGGCGGCGAAGCAGGCTGCCACGGCAGGGCACATGGGACAACCCATGGGGACCCATCAGACGTCAGCTATGCCCGGTCATGGAACCGGACAGCCCACGGGCCATGTCACCGAGGGAGTGGTGGGCTCACACCCTATTGGAACCAACAGAGGCCCGGGTGGGACTGCTACGGCCCATAATACCCGTGCGGGGGGAAACCCAAATGATTATGGGTATGGAACTGGGGGTACTTACAATTAA 459 0.5708 MQGGKKAGESIKETAANIGASAKAGMEKTKATVQEKAERMTARDPMQKELATQKKEAKMSQAELDKQAARQHNTAAKQAATAGHMGQPMGTHQTSAMPGHGTGQPTGHVTEGVVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTGGTYN* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1223 152 MobiDBLite consensus disorder prediction 1 152 - -
Gso3g1223 152 Pfam Late embryogenesis abundant (LEA) group 1 9 78 IPR005513 GO:0009793
Gso3g1223 152 MobiDBLite consensus disorder prediction 29 65 - -
Gso3g1223 152 MobiDBLite consensus disorder prediction 87 101 - -
Gso3g1223 152 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 46 1 151 - -
Gso3g1223 152 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 1 151 IPR005513 GO:0009793
Gso3g1223 152 MobiDBLite consensus disorder prediction 66 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1223 Gso-Chr3 37882347 37883611 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1223 - - gmx:547921 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1223 3 37882347 37883611 Gso3g1223 3 37882347 37883611 ECH
Gso19g1223 19 40736455 40737862 Gso3g1223 3 37882347 37883611 GST