Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1207 ATGACGGAACCAACGGAGCCATGCACGTCATCTTCCTTGGCAAGGGACCCAACCACCGTGATCCACCCAAGGCGCGAGCCCTTCGAGCACGGCCTCTTGCCGATCCCGCGCCTCATCTTCTCCGACCCGGCGCAAACCCTAATTCCGTTGAAGCAGAAGCTTCTCGAGTCTTCCTCCAACCAGCGAGTCGACTCAGCGGCAATCTCCGAGTCACTTCAGATCTCCATTGAGCAAGCCAGGCTCGTCCTCGATACTCTTGCCTCGGTTCTGCACTCCGACGCCGAACCTCTCGTCGCCGCCAAGCTCGGAGAAATCGATTCCGTCGGCGTCGACGTCCATGATCTGGTTTTGTTCCTCTACATTCAATCCTACAAGAGGCTCCTCCCGCGCACGCACAAGGACTCCGCCGCCGTCGCCGATGTCTGGCCTTCCACCTCCGCCTTCGACGGCTACTTGTCCGCACTCTCGCCGCTTCAGCTTGTGCGCAGCAACAGCCGAAGGGGTATGCCATCGCAGGTTGATGAAGAGGCGCATCAGCTGTCGTATCTGCAAAAACATTTAGCTAACATTGTATCTCTTGTAGCACAGCCTGTGGAGGGAGAAGGCGAAGAATCTCTGGTTTTAACCATGGATAGATTTGAGCACCTTGGGTTTCTAATTCAGTTTGGTGATAAGGGATCTGAAGGAAATTCTTTTAGTCAATCTTCTCCCTTTTTTGCAAACTCAGACCCTGATATGCCTGCTGTTCCTGTTCCTGCTGCTCAAGTTCATGATTGGCTTCTACAGAATATAGCTGCTGCTTTGGAATATATTTCTGAACGAACTTCTTCTAAGGAGAATGGCCCAGCTAGTGCCTCTGATCAGGATGTTGCTATGACTGATGCATGCACTACCTCAGTTAACAAGGTCTCAACAAGTACTAGAAGTGCAAGTTTCATTGAAGGGATCTCCAAATCGTCATATGTGAAGCATGCATCTGACATTAAAGGTTCCTCTGTTAAGGTTCTAAATTGCCATGAGTCTGCCATATACATCTTAGCACCTTTGAGATATGCAACTGTCTATGGATGTTCAGATGCAACAGTAGTTATTGGAGCAGTTGGCAAGGCTGTGAGAGTAGAACACTGCGAACGAGTTCATGTAATCGTAGCCGCAAAGCGTATTTGTATTGCTAATTGTCGTGAATGTGTTTTCTTTTTGGGAGTGAACCAGCAACCTCTTATTCTTGGTGATAACCATAAACTGCAGGTGGCTCCCTATAATACATTTTACTCCCAATTGGAAGAGCATATGAATGAAGTTGGAATTGTGCCCACAGTTAACCGATGGGATGAGCCTCTAGCATTGGGCATGGTTGATCCCCATGATTCATTATCTCATCCAGCGGGTGTCTCTGATGTTCAAGCTGAGTCTGCTACACGTGTGGACCCTGATCAGTTCACTAATTTTGTGATTCCAAATTGGTTTGGAGCAGAGTCCACAGGGGCTACAAAAGGCAACCCATTCATGTTACCAGATGCCTATATGGCATCTCAGCATAAAAATCAAAAAAATTTAGGGGAGATAAGGCAACTCTTACGAGAAGCACCTTTAGAAGAAAGTCGCAAACGAGAATTGTCATCTGCACTTCATGTCTACTTCAAGGACTGGTTATATGCTTCAGGAAACATTCGTCAGCTTTATTGTCTACAAGGCGATTGA 1701 0.478 MTEPTEPCTSSSLARDPTTVIHPRREPFEHGLLPIPRLIFSDPAQTLIPLKQKLLESSSNQRVDSAAISESLQISIEQARLVLDTLASVLHSDAEPLVAAKLGEIDSVGVDVHDLVLFLYIQSYKRLLPRTHKDSAAVADVWPSTSAFDGYLSALSPLQLVRSNSRRGMPSQVDEEAHQLSYLQKHLANIVSLVAQPVEGEGEESLVLTMDRFEHLGFLIQFGDKGSEGNSFSQSSPFFANSDPDMPAVPVPAAQVHDWLLQNIAAALEYISERTSSKENGPASASDQDVAMTDACTTSVNKVSTSTRSASFIEGISKSSYVKHASDIKGSSVKVLNCHESAIYILAPLRYATVYGCSDATVVIGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLILGDNHKLQVAPYNTFYSQLEEHMNEVGIVPTVNRWDEPLALGMVDPHDSLSHPAGVSDVQAESATRVDPDQFTNFVIPNWFGAESTGATKGNPFMLPDAYMASQHKNQKNLGEIRQLLREAPLEESRKRELSSALHVYFKDWLYASGNIRQLYCLQGD* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1207 566 Gene3D - 310 473 IPR016098 -
Gso3g1207 566 SMART carp 376 410 IPR006599 -
Gso3g1207 566 SMART carp 338 375 IPR006599 -
Gso3g1207 566 PANTHER UNCHARACTERIZED 15 566 IPR039589 -
Gso3g1207 566 Pfam Tubulin binding cofactor C 330 445 IPR012945 -
Gso3g1207 566 PANTHER BNAC04G02540D PROTEIN 15 566 - -
Gso3g1207 566 ProSiteProfiles C-CAP/cofactor C-like domain profile. 300 436 IPR017901 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1207 Gso-Chr3 37722683 37730604 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1207 K16810 - gmx:100819271 1109.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1208 19 40565627 40574981 Gso3g1207 3 37722683 37730604 GST