Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1206 ATGCAGAGGCCTCCACCAGAAGATTTTCTGTTGAAGGAGACCAAACCCCACCTTGGAGGGGGAAAAGTCTCTGGCGACAAGCTCACTAGCACTTATGACCTAGTCGAGCAAATGCAGTATCTCTATGTGAGGGTTGTGAAAGCTAAGGACTTACCTGCAAAGGATGTCACTGGCAGTTGTGACCCTTATACTGAAGTCAAGCTGGGGAACTACAAAGGCACCACTCGGCACTTCGAGAAGAAGTCTAATCCCGAATGGAACCAGGTTTTCGCTTTCTCCAAAGACCGCATTCAGGCTTCCATACTGGAGGTCACTGTGAAGGACAAGGATGTCGTGAAAGATGACTTCATTGGTCGTGTCTTATTTGACCTCAATGAGATCCCAAAGCGTGTTCCACCGGACAGTCCCTTGGCACCGCAGTGGTATAGGCTGGAGGACAGAAAGGGTGACAAGGCGAAGGGGGAGCTAATGCTGGCTGTTTGGATGGGTACACAAGCTGATGAGGCGTTTCCCGAAGCGTGGCACTCGGATGCTGCAACCGTTAGCGGGACTGATGCTCTTGCAAACATTAGATCAAAGGTATATCTATCTCCTAAGCTTTGGTATTTGAGGGTTAATATAATAGAGGCGCAAGACTTGCAGCCAAGTGATAAGGGTAGATACCCTGAAGTTTTTGTGAAGGCTGCTCTGGGAAATCAGACCTTGAGGACTAGAATCTCTCAGAGCAGGACTATCAATCCAATGTGGAATGAGGATTTGATGTTTGTGGCTGCTGAGCCGTTTGAAGAGCCTCTGACTCTGAGTGTGGAAGACAGAGTTGCACCTAACAAAGAGGAGTCGCTGGGGAAGTGTGCAATTCCTTTGCAGATGGTGGATCGGAGACTGGATCAAAAGCCTGTGAATACTAAGTGGTATAATATTGAAAAGTACATTGTTATTATGGAAGGGGAAAAGAAGAAGGAAATCAAGTTTTCAAGCAAGATTCATATGAGGATCTGTCTGGAAGGCGGTTATCATGTTTTGGACGAATCAACTCACTACAGCAGTGATCTTCGTCCAACTGCGAAGCAGCTGTGGAAGTCCAGTATTGGAGTTCTTGAATTGGGTATATTGAATGCTCAGGGTTTGATGCCAATGAAAACAAAAGATGGTAAGGGGACTACTGATGCTTATTGTGTAGCAAAATATGGGCAGAAATGGGTGCGAACAAGGACAATCATTGATAGCTTTGCACCCCGGTGGAATGAACAGTATACTTGGGAGGTTTTTGATCCTTGCACTGTCATTACAATTGGTGTATTTGATAACTGTCATTTGCATGGTGGTGATAAGCCTGGAGGGGCAAAAGATTCCAAAATTGGGAAGGTAAGAATTCGTCTTTCTACCCTCGAGACTGACCGTGTCTATACACATTCCTATCCACTTCTAGTTCTTCATCCAAATGGTGTGAAGAAAATGGGTGAAATCCACTTGGCTGTTAGGTTTACTTGTTCTTCTTTGCTTAATATGATGCACATGTATTCACTACCTTTGTTGCCAAAGATGCATTATATTCACCCACTAACTGTCAGCCAGCTTGATAATCTGAGGCATCAAGCTACTCAGATTGTTTCAATGAGACTGAGTCGTGCCGAGCCACCGCTGAGAAAGGAGATAGTGGAATATATGCTAGATGTGGGTTCCCACATGTGGAGTATGAGAAGAAGCAAGGCGAACTTTTTCAGGATTATGGGAGTTTTGGGTGGATTAATTGCTGTAGGAAAATGGTTTGACCAGATTTGCAACTGGAAAAATCCAATCACAACAGTTCTGATCCATATCCTGTTCATAATATTGGTCATGTACCCTGAGCTTATCTTACCAACAATCTTCCTTTACCTCTTCTTGATCGGAGTTTGGTACTACAGATGGAGGCCAAGGCACCCACCTCACATGGACACTCGCCTCTCCCATGCAGATTCTGCGCATCCTGATGAACTGGATGAAGAGTTTGACACATTCCCAACCACCAGGCCTTCAGACATCGTGAGGATGCGATACGACCGACTTAGAAGCATTGCTGGGAGGATACAGACTGTGGTTGGTGATTTGGCCACTCAAGGGGAGAGGCTGCAGTCTTTGCTCAGCTGGAGAGATCCAAGAGCCACTGCCCTCTTTGTGATTTTCTGTCTGGTTGCTGCCATTGTACTCTATGTCACTCCTTTCCAAATTGTCGCACTTTTCACTGGAATCTATGTGTTGAGACACCCGAGGTTCCGCCACAAGCTTCCTTCGGTGCCTCTGAATTTCTTCAGGAGGCTGCCTGCAAGAACTGATTGCATGCTTTGA 2328 0.4588 MQRPPPEDFLLKETKPHLGGGKVSGDKLTSTYDLVEQMQYLYVRVVKAKDLPAKDVTGSCDPYTEVKLGNYKGTTRHFEKKSNPEWNQVFAFSKDRIQASILEVTVKDKDVVKDDFIGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKAKGELMLAVWMGTQADEAFPEAWHSDAATVSGTDALANIRSKVYLSPKLWYLRVNIIEAQDLQPSDKGRYPEVFVKAALGNQTLRTRISQSRTINPMWNEDLMFVAAEPFEEPLTLSVEDRVAPNKEESLGKCAIPLQMVDRRLDQKPVNTKWYNIEKYIVIMEGEKKKEIKFSSKIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGKGTTDAYCVAKYGQKWVRTRTIIDSFAPRWNEQYTWEVFDPCTVITIGVFDNCHLHGGDKPGGAKDSKIGKVRIRLSTLETDRVYTHSYPLLVLHPNGVKKMGEIHLAVRFTCSSLLNMMHMYSLPLLPKMHYIHPLTVSQLDNLRHQATQIVSMRLSRAEPPLRKEIVEYMLDVGSHMWSMRRSKANFFRIMGVLGGLIAVGKWFDQICNWKNPITTVLIHILFIILVMYPELILPTIFLYLFLIGVWYYRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTTRPSDIVRMRYDRLRSIAGRIQTVVGDLATQGERLQSLLSWRDPRATALFVIFCLVAAIVLYVTPFQIVALFTGIYVLRHPRFRHKLPSVPLNFFRRLPARTDCML* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1206 775 SMART C2_3c 365 472 IPR000008 -
Gso3g1206 775 SMART C2_3c 202 300 IPR000008 -
Gso3g1206 775 SMART C2_3c 40 136 IPR000008 -
Gso3g1206 775 ProSiteProfiles C2 domain profile. 22 142 IPR000008 -
Gso3g1206 775 Pfam C2 domain 201 307 IPR000008 -
Gso3g1206 775 Pfam C2 domain 40 133 IPR000008 -
Gso3g1206 775 Pfam C2 domain 365 475 IPR000008 -
Gso3g1206 775 MobiDBLite consensus disorder prediction 1 15 - -
Gso3g1206 775 Gene3D C2 domain 188 334 IPR035892 -
Gso3g1206 775 Gene3D C2 domain 24 162 IPR035892 -
Gso3g1206 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 355 IPR035892 -
Gso3g1206 775 MobiDBLite consensus disorder prediction 1 23 - -
Gso3g1206 775 Gene3D C2 domain 340 496 IPR035892 -
Gso3g1206 775 ProSiteProfiles C2 domain profile. 347 473 IPR000008 -
Gso3g1206 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 364 505 IPR035892 -
Gso3g1206 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 40 177 IPR035892 -
Gso3g1206 775 CDD C2D_MCTP_PRT_plant 365 492 - -
Gso3g1206 775 CDD C2C_MCTP_PRT_plant 202 353 - -
Gso3g1206 775 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 1 775 - -
Gso3g1206 775 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Gso3g1206 775 Pfam Plant phosphoribosyltransferase C-terminal 620 775 IPR013583 -
Gso3g1206 775 PANTHER PROTEIN QUIRKY-LIKE 1 775 - -
Gso3g1206 775 CDD C2B_MCTP_PRT_plant 40 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1206 Gso-Chr3 37714306 37718082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1206 1 775 Lipid Metabolism Gene Families AT3G57880 90.452 0.0 1489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1206 - - gmx:100818371 1574.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1206 3 37714306 37718082 Gso3g1206 3 37714306 37718082 ECH
Gso19g1207 19 40554758 40558522 Gso3g1206 3 37714306 37718082 GST