Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1185 ATGAACACCATCTCATCACTGACCCTTGATTCTCACGCAATATGCAACCCTCAGCGCAGCATCTCCCTCCGCCAAGTTCGCCCCACCACTCGAAACGTCGTCGTGTGCTCCGCGAAGCCCGTCGCGTCTCCCCCCACCAAGCTCGCCGCCGCCGACACCTCCGGCTGCCGCATCGGCGAACTGAGCCAGGTCTCCGGCGTGCTTGGCTGCCAGTGGGGCGACGAGGGCAAAGGGAAGCTCGTTGACATATTGGCCCAACACTTCGAAATCGTTGCTCGCTGCCAGGGTGGAGCTAATGCTGGGCATACTATTTACAACGCAGAAGGGAAAAAGTTTGCTCTTCATCTTGTTCCTTCTGGTATTCTCAATGAGGATACTCTGTGTGTTATTGGGAATGGAGTTGTAGTGCACCTGCCGGGGTTGTTTAAGGAGATTGACGGTCTTGAATCGAACGGGGTCTCTTGCAAGGGAAGGATATTGATATCTGATCGTGCTCACCTGTTGTTTGATTTCCACCAAGTGGTGGATGGGCTAAGAGAAGCGGAGCTTGCTAAATCCTTCATTGGCACCACAAAGAGAGGCATTGGACCCTGCTACTCCAGCAAGGTTAACCGTAATGGCCTCCGAGTGGGTGATTTGAGGCACATGGATACTTTCCCTCAGAAGCTTGATCTTATATTGTCAGATGCAGCATTGAGGTTCAAAGATTTTAACTATGGCCCATATATGCTCAGGGAAGAAGTTGAAAAATACAAGAGGTATGCCGAGAGGTTGGAGCCCTTTATTGCTGATACTGTGCTTGTCATGAATGACGCCATAGAACAAAAGAAGAAGATTTTGGTTGAAGGAGGACAAGCTACCATGTTGGACATTGATTTTGGAACTTATCCCTTTGTTACTTCTTCTAGCCCATCAGCTGGTGGGATATGCACTGGTCTTGGTATTGCTCCAAGGGTACTTGGTGATTTAATAGGAGTGGTGAAGGCATACACTACAAGAGTTGGTTCTGGTCCTTTTCCAACTGAAATTTTGGGTTCAGGAGGTGACCTCCTCAGATTTGCTGGGCAGGAGTTTGGCACAACTACTGGCCGCCCTCGACGGTGTGGCTGGCTCGATTTAGTTGCACTGAAATACTCTTGTCAGATCAACGGTTTCTCATCGTTGAATCTTACCAAGCTAGATGTTTTATCAGATCTTGAAGAAATACAGTTAGGTGTCTATTACAAACTTGCTGATGGCACCCCAATCAAATCATTCCCTTCAGATCTTCGTCTTCTTGAGCAACTGAAGGTGGAATATGAAGTACTTCCTGGATGGAAATCTGATATATCTTCCATAAGAAACTATTCTGACCTTCCAAAGGCTGCAAGGCTGTATGTGGAAAGGATAGAAGAACTTGTGGGGGTCCCTATTCACTACATTGGTATTGGGCCTGGACGTGATGCTCTCATATACAAATGA 1461 0.4791 MNTISSLTLDSHAICNPQRSISLRQVRPTTRNVVVCSAKPVASPPTKLAAADTSGCRIGELSQVSGVLGCQWGDEGKGKLVDILAQHFEIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTLCVIGNGVVVHLPGLFKEIDGLESNGVSCKGRILISDRAHLLFDFHQVVDGLREAELAKSFIGTTKRGIGPCYSSKVNRNGLRVGDLRHMDTFPQKLDLILSDAALRFKDFNYGPYMLREEVEKYKRYAERLEPFIADTVLVMNDAIEQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVLGDLIGVVKAYTTRVGSGPFPTEILGSGGDLLRFAGQEFGTTTGRPRRCGWLDLVALKYSCQINGFSSLNLTKLDVLSDLEEIQLGVYYKLADGTPIKSFPSDLRLLEQLKVEYEVLPGWKSDISSIRNYSDLPKAARLYVERIEELVGVPIHYIGIGPGRDALIYK* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1185 486 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 67 326 IPR042109 -
Gso3g1185 486 SMART adenylsucc_synt 64 485 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gso3g1185 486 ProSitePatterns Adenylosuccinate synthetase GTP-binding site. 71 78 IPR018220 GO:0005525
Gso3g1185 486 PANTHER ADENYLOSUCCINATE SYNTHETASE 16 486 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gso3g1185 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 485 IPR027417 -
Gso3g1185 486 ProSitePatterns Adenylosuccinate synthetase active site. 194 205 IPR033128 -
Gso3g1185 486 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 327 486 IPR042111 -
Gso3g1185 486 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 163 261 IPR042110 -
Gso3g1185 486 PANTHER ADENYLOSUCCINATE SYNTHETASE, CHLOROPLASTIC 16 486 - -
Gso3g1185 486 TIGRFAM purA: adenylosuccinate synthase 67 484 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gso3g1185 486 Hamap Adenylosuccinate synthetase [purA]. 1 486 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gso3g1185 486 CDD AdSS 63 485 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gso3g1185 486 Pfam Adenylosuccinate synthetase 67 484 IPR001114 GO:0000166|GO:0004019|GO:0006164
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1185 Gso-Chr3 37406358 37411107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1185 K01939 - gmx:100811618 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1185 3 37406358 37411107 Gso3g1185 3 37406358 37411107 ECH
Gso19g1185 19 40265482 40268631 Gso3g1185 3 37406358 37411107 GST