Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1154 ATGGTCCACTATCACCGCTCCCATCAACCCAGAAAGGCCAACAACACAGACTCCATCATCAAAGACGAAGAGTCACAGAACAACATCACGTTGGATTGTTCATCCTCTGCTTACTACAAGAGAACAAGGCCCAAGTTGTTGTCTTTTCTCTTCCTCATCACCTTCCTCTCTTGCTGCTATGTTTTTGCTCCTCTTTTCCTTGGCCCTTCTTTCCCTCTATCTCTCTTGTACTCTCCCGCAACTGAAAATGATTTGAAACAAGATGGGGTTGGTGCTAATGATTCTCCATGCTCTTCTGTTTCTACTGGAACTATATGTTGTGATAGAAGTGGTTATCGTTCTGATGTCTGTGTGATGAAAGGTGATATAAGAACACACTCTGCTTCCTCTTCGGTCTTCCTCTACAATTCAAGGAGCAACAACAATGTTTCGAGAAATTTTGAAGAAGAACTCCAACATGAAAAGATCAAGCCGTATACTAGAAAATGGGAGACAAGTGTTATGGACACCATTGATGAATTAAACCTCATCTCGAAGAAAGTGAATTCAGGTAGTGTTGGAGGTTGTGATGTCCAACATGATGTTCCAGCAGTGTTCTTCTCAAATGGGGGCTACACTGGCAATGTTTATCACGAATTCAATGATGGAATCGTACCCTTATACATTACTTCTCAGCATTTCAAGAAGAAGGTTGTGTTTGTGATTCTTGAGTATCATAATTGGTGGATCATGAAGTATGGAGATATCCTTTCTCGCCTATCGGATTTTCCGCCAATCAATTTTCAAGGAGACAATAGAACTCATTGCTTCACAGAAGCAATAGTTGGTCTCAGAATCCATGATGAGCTAACTGTGGATTCTTCATTGATGAGGGGTAACAAGAGCATTGCTGATTTTAGAAACCTTTTGGATAAAGCTTATTGGCCAAGGATCAAGGGGCTGATTCGAGACGAAGAAAGGAAAGCACAAGAGAAATTGAGAGAACAAGTCTCTTCATCTGAATCATCAGAAGCCTCACAACAACAGTATATAACTATTAGGCAACAAGTGCAAGAAAATCCAATGAAGAAGCCTAAGTTGGTTATTCTTTCTAGAAGTGGTTCAAGAGCTATAACTAATGAGAATTTGCTTGTGAAGATGGCAAAGGAAATTGGGTTTTTGGTGCAAGTTTTGAAGCCCGACAGAACAACAGAAATGGCAAAGATTTATAGGACTCTCAATGCAAGTGATGTCATGATTGGTGTTCATGGAGCAGCTATGACACATTTTCTGTTCCTGAGACCTGGTTCTGTGTTTATTCAAGTGGTTCCTCTTGGTACCACATGGGCTGCAGAAACTTATTATGGGGAACCAGCAAGGAAGCTTGGATTGAAATACATTGGCTATCAAATTTTGCCTAGAGAGAGCACTTTGTATGAGAAATATGATAAAAATGATCCTATTCTGAGAGACCCTACAAGCATTAACAAGAAGGGGTGGGAATACACAAAGAAGATCTATCTTGACAGCCAAAATGTCATGTTAGACCTCAGAAGATTCAGAAAAAGGTTGCATCGAGCGTATGAGTATACACTCTCCAAATCAAAACTGAGTCTCCAACATCAACCAATGTGA 1614 0.404 MVHYHRSHQPRKANNTDSIIKDEESQNNITLDCSSSAYYKRTRPKLLSFLFLITFLSCCYVFAPLFLGPSFPLSLLYSPATENDLKQDGVGANDSPCSSVSTGTICCDRSGYRSDVCVMKGDIRTHSASSSVFLYNSRSNNNVSRNFEEELQHEKIKPYTRKWETSVMDTIDELNLISKKVNSGSVGGCDVQHDVPAVFFSNGGYTGNVYHEFNDGIVPLYITSQHFKKKVVFVILEYHNWWIMKYGDILSRLSDFPPINFQGDNRTHCFTEAIVGLRIHDELTVDSSLMRGNKSIADFRNLLDKAYWPRIKGLIRDEERKAQEKLREQVSSSESSEASQQQYITIRQQVQENPMKKPKLVILSRSGSRAITNENLLVKMAKEIGFLVQVLKPDRTTEMAKIYRTLNASDVMIGVHGAAMTHFLFLRPGSVFIQVVPLGTTWAAETYYGEPARKLGLKYIGYQILPRESTLYEKYDKNDPILRDPTSINKKGWEYTKKIYLDSQNVMLDLRRFRKRLHRAYEYTLSKSKLSLQHQPM* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1154 537 PANTHER GLYCOSYLTRANSFERASE 38 529 IPR007657 GO:0016757
Gso3g1154 537 MobiDBLite consensus disorder prediction 1 20 - -
Gso3g1154 537 PANTHER EGF DOMAIN-SPECIFIC O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE-LIKE 38 529 - -
Gso3g1154 537 Pfam Glycosyltransferase 61 325 432 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1154 Gso-Chr3 36931270 36934092 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1154 - - gmx:100800591 1049.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1154 3 36931270 36934092 Gso3g1154 3 36931270 36934092 ECH
Gso19g1154 19 39782411 39785092 Gso3g1154 3 36931270 36934092 GST