Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1149 ATGATGTGTCGTAGGACGGAGTTATATAGAGAGCTGAAGCAGCGTATAACACATTTTCGACATTTCTGCGACACGCATCAAAAACATCTTCAAGATCTCGAATTGCTCAAGTGCTTCAAATCCGAGATTCAATTCGAGCTTGCCTCCAATCACTTTCAGAATGCTCAAAGTGGTTCCTTAGGGGACTTTGTGGTGGACCCCACCTCACCCAATTCCAAAGATGTGGTTTTGCGAAGAAAATTCGATTCGGGTGAGGAAGTTGCAATCTCTGCTATTCTGGGACCTCCCAACTATGTGAAAGACCTTATTTTTCCGAGGGATGCTTTTATGAAAGTTTGTGTGAAAAAGCCAGCATTGAGCTTCATGGTACAGTTTGACTGTGATGTTTATGAAGAAACTGATAAGGGCTCTGATTTTGACATCTACAATGCTTATTATCTCAAATCATCTACATGTCTCAGCACTTCCATTTACAGAGGCCCTTTATTCCGCACATTGGATGATGAGTTGCAAGATGCTCTCAAGGAATACCTGATAGCCAAGGGCATTGGAGTAAGTCTGACCAATTTCCTTCTCCACTACCTACACAAAAGAGAGCAAGAGCAGTACGTGAACTGGTTGAAGAAAGGTGAAGCAGCATTTGTGGCAAAAGAAAGGTCATTGAGGGAATCATCAGAGACACATTCTTGA 690 0.4246 MMCRRTELYRELKQRITHFRHFCDTHQKHLQDLELLKCFKSEIQFELASNHFQNAQSGSLGDFVVDPTSPNSKDVVLRRKFDSGEEVAISAILGPPNYVKDLIFPRDAFMKVCVKKPALSFMVQFDCDVYEETDKGSDFDIYNAYYLKSSTCLSTSIYRGPLFRTLDDELQDALKEYLIAKGIGVSLTNFLLHYLHKREQEQYVNWLKKGEAAFVAKERSLRESSETHS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1149 229 PANTHER COMPLEMENT COMPONENT 1 16 215 IPR003428 GO:0005759
Gso3g1149 229 Gene3D Mitochondrial glycoprotein 30 215 IPR036561 -
Gso3g1149 229 Pfam Mitochondrial glycoprotein 110 209 IPR003428 GO:0005759
Gso3g1149 229 SUPERFAMILY Mitochondrial glycoprotein MAM33-like 32 209 IPR036561 -
Gso3g1149 229 PANTHER MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN 16 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1149 Gso-Chr3 36875427 36879076 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1149 K15414 - gmx:100799012 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1149 3 36875427 36879076 Gso3g1149 3 36875427 36879076 ECH
Gso19g1146 19 39685772 39691650 Gso3g1149 3 36875427 36879076 GST