Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1147 ATGAGCACACATGGTTCTTACAGCATGAGATCCAAAGGCTCCTTTGAAAATGAAGCCAAGGCAACAGGGAAAGAAAGTGGGGGAGGAGGCGGTGGTGGAGGTGGCAAGAGTGGAAAGACAATGTCAACCAACAGCAAGGAGAATTTGTTCATAGTTTTTCTTGTTACACTTTGGTACTCTTCAAACATTGGTGTGATCCTTCTGAACAAGTATCTGCTCTCAAACTATGGATTCAAGTTCCCAATCTTCCTCACAATGTGCCACATGTCGGCCTGTGCTGTCCTCAGCTATGTCTCCATTGTGTTCTTCAAGGTGGTGCCTCAGCAGATGATCAAATCAAGGTCCCAGTTCATCAAGATTGCAACTTTGAGCCTTGTTTTCTGTGCCTCTGTGGTTGGTGGCAACATTTCTCTCAGGTACCTTGCTGTGTCATTCAACCAGGCTGTTGGGGCAACCACACCCTTTTTCACTGCTGTTTTTGCCTATTTGGCCACCCTCAAGAGAGAGGCCTGGGTTACCTATGGTGCCCTGGTTCCTGTTGTTGCTGGAGTTGTCATTGCAAGTGGGGGCGAGCCAGGGTTTCACTTATTTGGATTCATTATGTGCCTAAGTGCAACCGCTGCAAGAGCCTTCAAGTCTGTCCTTCAGAGCATTTTACTCTCTTCTGAAGGGGAAAAGTTGAACTCAATGAACTTGCTCCTGTATATGTCTCCAATCGCGGTCCTAGTTTTGTTGCCTGCAGCACTTATCATGGAGCCTAATGTCGTAGATGTCATATTGACGCTTGCAAAGGACCATAAATCTGTGTGGCTACTTCTTTTCCTAAACTCAGTCACAGCATATGCAGCTAACTTAACAAACTTCTTGGTGACTAAACATACCAGTGCTCTCACACTCCAGGTGTTAGGCAATGCGAAAGGTGCTGTAGCTGTTGTAATCTCAATACTCCTATTCAGAAACCCTGTCACTGTTCTTGGCATGGGTGGCTATACAATTACCGTGATGGGAGTGGCTGCATATGGAGAAACAAAAAGGAGGTTTAGATGA 1047 0.4594 MSTHGSYSMRSKGSFENEAKATGKESGGGGGGGGGKSGKTMSTNSKENLFIVFLVTLWYSSNIGVILLNKYLLSNYGFKFPIFLTMCHMSACAVLSYVSIVFFKVVPQQMIKSRSQFIKIATLSLVFCASVVGGNISLRYLAVSFNQAVGATTPFFTAVFAYLATLKREAWVTYGALVPVVAGVVIASGGEPGFHLFGFIMCLSATAARAFKSVLQSILLSSEGEKLNSMNLLLYMSPIAVLVLLPAALIMEPNVVDVILTLAKDHKSVWLLLFLNSVTAYAANLTNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTVLGMGGYTITVMGVAAYGETKRRFR* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1147 348 MobiDBLite consensus disorder prediction 1 40 - -
Gso3g1147 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 339 - -
Gso3g1147 348 Pfam Triose-phosphate Transporter family 51 340 IPR004853 -
Gso3g1147 348 MobiDBLite consensus disorder prediction 1 15 - -
Gso3g1147 348 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN-RELATED 40 347 - -
Gso3g1147 348 PANTHER SOLUTE CARRIER FAMILY 35 40 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1147 Gso-Chr3 36845425 36850378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1147 42 348 Organic Solute Cotransporters AT5G04160 81.759 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1147 - - gmx:100797956 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1147 3 36845425 36850378 Gso3g1147 3 36845425 36850378 ECH
Gso19g1144 19 39662474 39667829 Gso3g1147 3 36845425 36850378 GST