Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1129 ATGACTATGTTGTTGTCCACAATCATTGTTCCTTCCACCAAGCTCATCATCTTCAACAACAACAACACGCAAGAGCGTGCACTTCCAACTTTTCGTCATTTCTCAGATTCCAGCAAACGCTTCGAGAAAGTGTCGTCCTTTATTGCTTTTGCGGTGAACGGTGGCTCCGCTCATGTTAAAGCTACGCATAGGAGAGATGGTAGTAGAAACCCGCTTATGAGTGAGGGGAGAGATGAAGATGAAGCTAGAGGACCCATTTGCCCTGGTTGTGGAGTCTTCATGCAAGATAAGGACCCTAATTTTCTCGGGTATTACCAACCAAGGAAGATGAAAATGGAAGAGTTTTCAGAAGAGGAGGATGATGATGTGGGGTTTTTGAATGGAAGTGAAAGTGAGCTTGGAGAAGAAAGTGAAGGGTTAATAGATGAGTTAGATTGGGATTCTGATGATTTGGAAGATGAGTTATTGGGTGAAGATGATAATGAGAAGTTGGAATTGGATGGGTTTACACCTGCTGGAGTTGGGTATGGTAACATAACTGAGGAGTATTTGGAGAGGGTGAAGAAGAAGAAGGTTTCCAAAGCTGAGAAGAAGAGGATGGCTAAGGAGGCTGACAAGGAGAAAGAGGAGGCCACCGTGTGTGCCCGGTGCCATTCCTTGAGAAACTATGGCCAGGTGAAGAACCAGACGGTGGAGAATCTCATACCTGATTTTGATTTCGATAGGTTGATTTCGACGCGGCTGATGAACCCTTCTGGGAGTGGCAGTGCTACTGTTGTTGTCATGGTTGTGGACTGTGTTGATTTCGATGGTTCATTCCCTAGAACTGCGGTGAAGTCGTTGTTCCAGGCGTTGGAAAGAATTCAGGATAACTCGAAGAGGTCCAAGAAGCTGCCAAAACTTGTTCTTGTGGCCACAAAGGTTGATCTCCTTCCGTCGCAGGTTTCTCCTGCAAGGTTGGATAGATGGGTTAGAAACCGTGCAAGATCCGGAGGAGCGCCTAAGTTAAACGGGGTTTATATGGTCAGTTCGAAGAAGGATTTAGGTGTGAGGAATTTGTTGTCATTTGTGAAGGATTTGGCTGGTCCTCGTGGGAATGTGTGGGTGATTGGAGCTCAAAATGCAGGGAAGTCTACTCTGATCAATGCGTTTGCAAAGAAACAAGGAGCTAAAGTTACGAAGCTCACGGAAGCTCCAATTCCTGGCACAACGCTTGGGATCTTGAGAATTGCAGGAGTTTTGCCAGCTAAGACTAAGATGTTTGACACTCCAGGGCTCTTGCACCCATATTTAATGTCAATGAGATTGAACCGGGATGAGCAAAAGATGGTTGAGATACGGAAGGAACTTCGGCCTCGGACATACAGAATTAAGGTAGGGCAGGCTATACACATTGGTGGCTTGACAAGACTTGACCTTGTTGAAGCCTCTGTTGAAACAATATATGCCACAGTTTGGGCATCACTAAATGTTTCTCTTCACATGGGGAAAATAGAAAATGCTGACGAGGTTTGGAGAAATCATGTTGGTATCAGACTGCAGCCTCCCACTGGTAACGACCGTGCCGCCGAACTAGGAACATGGCAGGAAAGGGAAGTCAAAGTGTCTGGAACCAGTTGGGATGTCAACACCATTGACATAGCAATAGCGGGTTTAGGTTGGTTCTCATTGTGTCTCAAAGGTGAAGCAACCACAAAACTGTGGGTCTTCCATGGAGTAGAAGTAACCTTGAGAGAACCTTTGGTGCTTGACCGGGCGCCATCACTTGAGAAGCCAGGATTTTGGCTACCAAAAGCAATATCTGATGCTATTGGCAACCAAACCAAACTTGAAGCTCAAAGAAGGAAACAACAACTTGAAGATGAAGGTACGGAATACGTGGGGGCAGGGGCAGAGTTATCTGCATGA 1908 0.4596 MTMLLSTIIVPSTKLIIFNNNNTQERALPTFRHFSDSSKRFEKVSSFIAFAVNGGSAHVKATHRRDGSRNPLMSEGRDEDEARGPICPGCGVFMQDKDPNFLGYYQPRKMKMEEFSEEEDDDVGFLNGSESELGEESEGLIDELDWDSDDLEDELLGEDDNEKLELDGFTPAGVGYGNITEEYLERVKKKKVSKAEKKRMAKEADKEKEEATVCARCHSLRNYGQVKNQTVENLIPDFDFDRLISTRLMNPSGSGSATVVVMVVDCVDFDGSFPRTAVKSLFQALERIQDNSKRSKKLPKLVLVATKVDLLPSQVSPARLDRWVRNRARSGGAPKLNGVYMVSSKKDLGVRNLLSFVKDLAGPRGNVWVIGAQNAGKSTLINAFAKKQGAKVTKLTEAPIPGTTLGILRIAGVLPAKTKMFDTPGLLHPYLMSMRLNRDEQKMVEIRKELRPRTYRIKVGQAIHIGGLTRLDLVEASVETIYATVWASLNVSLHMGKIENADEVWRNHVGIRLQPPTGNDRAAELGTWQEREVKVSGTSWDVNTIDIAIAGLGWFSLCLKGEATTKLWVFHGVEVTLREPLVLDRAPSLEKPGFWLPKAISDAIGNQTKLEAQRRKQQLEDEGTEYVGAGAELSA* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1129 635 Gene3D - 253 429 IPR027417 -
Gso3g1129 635 CDD YqeH 214 426 - -
Gso3g1129 635 Coils Coil 190 212 - -
Gso3g1129 635 Pfam 50S ribosome-binding GTPase 367 439 IPR006073 GO:0005525
Gso3g1129 635 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 1 623 - -
Gso3g1129 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 257 476 IPR027417 -
Gso3g1129 635 MobiDBLite consensus disorder prediction 61 83 - -
Gso3g1129 635 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 1 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1129 Gso-Chr3 36604077 36608932 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1129 - - gmx:100805561 1174.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1129 3 36604077 36608932 Gso3g1129 3 36604077 36608932 ECH