Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1108 ATGGACGCCAAGTTCGGAAGCCTCTTCGAATCCATCGGAAACTTCTTCACCGGCGGTGAACAGATCCCGTGGTGTGACCGTGACGTCATCGCTGGCTGTGAGAGAGAAGTTGCAGAGGCTGCTAATGGTGACTCTGAGGAGCGGAAGAATGAGAGTATAATGAGGCTGTCATGGGCTCTTGTTCATTCAAGGCAAAAGGAAGATATTCAGCGCGGGATAGCCATGCTTGAAACTTCCTTGGGCAATGATAAAAGTCCTTTGCATCAAAGAGAGAAGCTTTATCTTCTGGCTGTTGGTTACTATAGAAGTAATGACTATGGAAGGAGCCGGCAGCTTGTGGAGCAATGTTTGGAGATTGCACCTGATTGGAGGCAGGCACTATCCCTTAAGAAAATAGTTGAAGATCGAATTGCTAAAGATGGTGTAATAGGAATTGGCATCACTGCAACAGCTGTGGGACTTATAGTTGGTGGCATTGCTACGGCACTGGCCAGGAGGAATTGA 504 0.4762 MDAKFGSLFESIGNFFTGGEQIPWCDRDVIAGCEREVAEAANGDSEERKNESIMRLSWALVHSRQKEDIQRGIAMLETSLGNDKSPLHQREKLYLLAVGYYRSNDYGRSRQLVEQCLEIAPDWRQALSLKKIVEDRIAKDGVIGIGITATAVGLIVGGIATALARRN* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1108 167 PIRSF TPR_repeat_11_Fis1 4 166 IPR016543 GO:0000266
Gso3g1108 167 PANTHER MITOCHONDRIAL FISSION 1 PROTEIN B 1 166 - -
Gso3g1108 167 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 1 166 IPR016543 GO:0000266
Gso3g1108 167 SUPERFAMILY TPR-like 10 166 IPR011990 GO:0005515
Gso3g1108 167 Pfam Fis1 C-terminal tetratricopeptide repeat 90 142 IPR028061 -
Gso3g1108 167 Pfam Fis1 N-terminal tetratricopeptide repeat 51 80 IPR028058 -
Gso3g1108 167 Gene3D Tetratricopeptide repeat domain 24 166 IPR011990 GO:0005515
Gso3g1108 167 CDD Fis1 23 141 IPR033745 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1108 Gso-Chr3 36311610 36314983 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1108 K17969 - gmx:100785425 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1103 19 39128514 39132305 Gso3g1108 3 36311610 36314983 GST