Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1099 ATGATTGGAAAAGATAGTGGTGTTATGAAGGCATGGGAGGCAACGATGAGAAAGACACATGCAGTTGCAAAGAAGCGTGCAAACAGCATATTTGGGACGATATCTTTGGCACATGTTGTGGATGAAGAAGAAAATAACAACAATGATGATTATGATGATGATAACGAAGAGAATGGGAAAAATGAGACATTTGATGTATACATTGAAGAGAAGGTTCTACCAAATGGGGATTACTACACAGGGGAATGGGCAAATAACTTCCCTCATGGGCTGGGGAAATACCTGTGGACAGACGGGTGCATGTATGTTGGAGAATGGTTCAAAGGGAAAACCAAAGGAAAAGGTAGGTTTAGTTGGCCTTCAGGAGCAACATATGAAGGTGACTTCAAGAGTGGTTTCATGGATGGGAATGGAACATACACAGGGTGTAATGGAGAGACTTATAAGGGACAATGGGTGATGAACTTGAAACATGGTCATGGTTTCAAGAGTTATGCAAATGGGGATTGGTATGATGGGGAGTGGAGGAAGGATTTGCAAGATGGGGAGGGAAGGTATGTGTGGAAGGATGAGAGCCATTATGTTGGGGAATGGAGGAATGGGACTATTTGGGGCAAAGGGTCATTTGTTTGGGCTGAAAATGGGAAAGTGTTTGAAGGGTTTTGGGAAGATGGTTTGCCAAAAGGGAAAGGCACTTTCAAGTGGCCTAATGGGAGTTTTTATGAGGGAAATTTTAGTAAAGATGGTAAGGATCAAAATGGTACATACCACAATTCATGCGAGTCATCATCAGATGGTGAAGAAGGGCATAGTGAATTATGGGATCCTCAAGAGTTGTATAGTGAGTTGAATGGTTATTCAGTTTGCCCTGGGGAGAAGGTTCAGGTGATGCCATCACACAAGAGGCTTGCGGTTTGGAGGTCTACAAAGACAGGGGAGAGTGCTAAGAACAGGAGAATATCGTTAGATGGAAGGGTGAGCATTGGCTTGGAGAAGCCAAGTGATAGGTTGCAAATATGGGATGGTGGGGAGAGTGATGCTAGTGGTGCTAAAACTCCTACTATGGGGAGTGATTTGGATGAAGATTTGATGGGTTTGCGTGTGGATGATGGTGGTGAAAGTTTGGGTCAACTCCAACCTATTAAAGCACCAAAGAAATCAAAGAGGCAGGGAGAGACCATATGCAAAGGACACAAAAATTATGAGCTCATGCTCAATTTGCAGCTGGGAATCAGGCATTCTGTTGCAAGGCCAGCTCCAACAGCATCACTTGATCTCAAGCCTTCAGCTTTTGACCCTAAGGAGAAAGTGTGGACAAGATTTCCACCCGAAGGATCCAAATACACTCCACCACATCCATCGTGTGACTTTAAATGGAAGGACTATTGCCCTGTAGTTTTTAGAACACTAAGGAAGCTATTCAAGGTGGATCCAGCTGATTACATGTTATCCATATGTGGAAATGAGGCCCTTCGCGAACTTTCCTCTCCAGGAAAAAGTGGTAGCTTCTTTTACTTGACCAATGACGACCGTTACATGATTAAAACAATGAAGAAAGCTGAAGTGAAAGTTCTATTGAGAATGCTTCCATCTTATTACAATAATTTTCGAGACCACCAAAATACTCTTTTGACAAAGTATTATGGCCTGCATTGTGTAAAGTTAAATGGACCTATTCAGAAGAAGGTTCGATTTATCATTATGGGCAACCTCTTTTGTTCTGAGTATATCACCCATAGACGCTACGATTTGAAGGGTTCCTCACTTGGACGCTTCTCAGATAAGCCTGAGACAGATATTAGTGAAACCACAATCCTTAAAGATCTTGATCTTAATTTTATATTTCGACTGGAGAAGTCCCGGTTCGAAGAATTTTGCAGACAAGTTGATAAGGATTGTGAGCTTCTAGAACAGGAGGGAATTATGGACTATAGTTTGCTATTGGGCATTTATTTCAAAGATATATCACCAGATGGGGAAATTATTCCTTTACAATCTCGGACTCCTGTTGGTGATTCCGAAAATGAAGCAAATCCCCATACTTCATGTGAAGACACAGACCAACCTCCTTCTGATCCTTCCAGTATCATATTGGGCATGAATATGCCAGCAAAGGTTGAAAGAACAGTGAGAAGAAGTGGTTGTGAATTACAACTTGTAGGAGAACCAATTGGAGAATTCTACAATGGTGTGTTGACTTTTGGTATCATAGACATACTTCAAGACTATGACATTAGCAAGAAGCTTGAGCATGCCTACAAATCCATTCAATATGACCCGACTTCAATATCAGCCGTTGATCCTATACAATATTCAAGGCGTTTTCGTGATTTCATATTTAGAATATTTACTGAAGACTCTTGA 2364 0.4154 MIGKDSGVMKAWEATMRKTHAVAKKRANSIFGTISLAHVVDEEENNNNDDYDDDNEENGKNETFDVYIEEKVLPNGDYYTGEWANNFPHGLGKYLWTDGCMYVGEWFKGKTKGKGRFSWPSGATYEGDFKSGFMDGNGTYTGCNGETYKGQWVMNLKHGHGFKSYANGDWYDGEWRKDLQDGEGRYVWKDESHYVGEWRNGTIWGKGSFVWAENGKVFEGFWEDGLPKGKGTFKWPNGSFYEGNFSKDGKDQNGTYHNSCESSSDGEEGHSELWDPQELYSELNGYSVCPGEKVQVMPSHKRLAVWRSTKTGESAKNRRISLDGRVSIGLEKPSDRLQIWDGGESDASGAKTPTMGSDLDEDLMGLRVDDGGESLGQLQPIKAPKKSKRQGETICKGHKNYELMLNLQLGIRHSVARPAPTASLDLKPSAFDPKEKVWTRFPPEGSKYTPPHPSCDFKWKDYCPVVFRTLRKLFKVDPADYMLSICGNEALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEVKVLLRMLPSYYNNFRDHQNTLLTKYYGLHCVKLNGPIQKKVRFIIMGNLFCSEYITHRRYDLKGSSLGRFSDKPETDISETTILKDLDLNFIFRLEKSRFEEFCRQVDKDCELLEQEGIMDYSLLLGIYFKDISPDGEIIPLQSRTPVGDSENEANPHTSCEDTDQPPSDPSSIILGMNMPAKVERTVRRSGCELQLVGEPIGEFYNGVLTFGIIDILQDYDISKKLEHAYKSIQYDPTSISAVDPIQYSRRFRDFIFRIFTEDS* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1099 787 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 386 570 IPR027484 -
Gso3g1099 787 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 486 781 IPR002498 GO:0016307|GO:0046488
Gso3g1099 787 Pfam MORN repeat 218 239 IPR003409 -
Gso3g1099 787 Pfam MORN repeat 79 101 IPR003409 -
Gso3g1099 787 Pfam MORN repeat 125 146 IPR003409 -
Gso3g1099 787 Pfam MORN repeat 148 169 IPR003409 -
Gso3g1099 787 Pfam MORN repeat 171 190 IPR003409 -
Gso3g1099 787 Pfam MORN repeat 102 123 IPR003409 -
Gso3g1099 787 Pfam MORN repeat 194 213 IPR003409 -
Gso3g1099 787 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 397 783 IPR002498 GO:0016307|GO:0046488
Gso3g1099 787 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 16 786 - -
Gso3g1099 787 SMART PIPK_2 427 784 IPR002498 GO:0016307|GO:0046488
Gso3g1099 787 MobiDBLite consensus disorder prediction 663 694 - -
Gso3g1099 787 PIRSF PIP5K_plant 13 787 IPR017163 GO:0005524|GO:0016308
Gso3g1099 787 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 74 201 - -
Gso3g1099 787 SMART morn 123 144 IPR003409 -
Gso3g1099 787 SMART morn 146 167 IPR003409 -
Gso3g1099 787 SMART morn 169 190 IPR003409 -
Gso3g1099 787 SMART morn 192 213 IPR003409 -
Gso3g1099 787 SMART morn 77 98 IPR003409 -
Gso3g1099 787 SMART morn 100 121 IPR003409 -
Gso3g1099 787 SMART morn 216 237 IPR003409 -
Gso3g1099 787 SMART morn 239 260 IPR003409 -
Gso3g1099 787 SUPERFAMILY SAICAR synthase-like 396 783 - -
Gso3g1099 787 MobiDBLite consensus disorder prediction 668 694 - -
Gso3g1099 787 Gene3D - 54 108 - -
Gso3g1099 787 Gene3D - 154 219 - -
Gso3g1099 787 Gene3D - 109 153 - -
Gso3g1099 787 Gene3D - 571 783 - -
Gso3g1099 787 CDD PIPKc_AtPIP5K_like 400 782 - -
Gso3g1099 787 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 16 786 IPR023610 -
Gso3g1099 787 MobiDBLite consensus disorder prediction 339 359 - -
Gso3g1099 787 MobiDBLite consensus disorder prediction 252 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1099 Gso-Chr3 36158444 36163533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1099 1 787 Acyl Lipid Metabolism Gene Families AT3G56960 63.590 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1099 K00889 - gmx:100781141 1620.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1099 3 36158444 36163533 Gso3g1099 3 36158444 36163533 ECH
Gso19g1095 19 38971196 38977405 Gso3g1099 3 36158444 36163533 GST