Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1092 ATGGCAATCCTTAAGATAACCAAAAAACACCACAAGCGTTTCAACAACCCTTTCCCTTCTTCAGTTTCAACCACCATCCCCTATGTCCAAGGCTCTCTCTTCTTCAATTCCAAAAGAGTTCCTTCGGATCAAACCTTCTCAATTGGCACTGATTTTCATCTTTCTTGGACCTCCAACAATGGAGGACACCTCTCAATTTCTCATCTTTCTCATCAAACCAGACCCATTTGGTCAACGATTCCAGGACAGGCTTTTGTCTCAGCTGCACTTGTTGACACAGAAGTTGAAGAAAGTAGAGGATCCTTTCTTGTCAAAGACAAAGATGTCCATTTGGTTTGCAATCACCAAACCATTGAGGATATTAGGGTGATTGAGGATATTAGTCAATTTGATCATCATTTGGAATGTGAAGTTGCAGATTCTCCTTGTGTGTCACAAGGGTTGGAAAAGAAAAGTGATGCACAAGAGATTCATCTTCCTACTTTGATGATCACTGGAAGGCTTTTCAATATGTCTAAGAAGAGTAAAAGGTTTCAAAAGCATGGCATTCAAGCAACTATGCAGTTTGAAGCAAAAGGGCCCTCTGTGTATGCAAGGTATTGGGTTTTGTTCAATCAGAAAGGCAACCATGAGGTTGGGTTTCAAGTGAAGATTGAGAAACCGAACTTCGTCTCACGCAACCAAGTTTCCAAAAAGGCTTCAGGAGTGTACCAGGGCTTTAAGAGGAGGCTAAGTAATAGGAAAAAGAGACTAGATTGGTGTTGGTACCTTTCAAGGCCAAGAGGGTTTGTGCTAGTTTCTTCAGTGGAGGAAGAGATAGGAAACTTGGATATTCCAAAACCAGAAGAGTTCAATAGAGTGTGGTTGACATATGCAAGTGATGAGAATGAGAGGTTTTACGGTTTTGGTGAGCAGTTTTCTCACATGAATTTCAAGGGCAAAAGGGTGCCAATCTTTGTTCAAGAACAAGGTATTGGCAGAGGAGATCAACCTATTACCTTGGCTGCTAACTTAATCAGTTACAGGGCAGGAGGTGATTGGAGTACAACTTATGCTCCTTCTCCATTCTACATAACATCAAAAATGAGGTCTGTCTGCCTTGAAGGGTATGATTATACTGTCTTCGATCTTACTAGACTTGACAGAGTACAGATACAGATACATGGAAATTCAGTTGAAGGGCGGATATTGCATGGGAACTCACCTTGTGAACTGATTGAACGTTCCACAGAAAGCATTGGAAGGCTACCTGAGCTTCCAGAGTGGATAATATCAGGTGCTATAGTTGGAATGCAGGGTGGCACAGATGCTGTACGTCACATTTGGGATGAACTAAGGACTTATGACGTTCCTGTCTCAGCATTTTGGTTGCAGGATTGGGTAGGGCAGAGAGAAACATTGATTGGTTCACAGCTCTGGTGGAATTGGGAAGTGGATGCACAAAGGTATTGGGGATGGAAGGAACTTATCAAAGATCTTAGCTCTCAGAATATAAAGGTTATGACGTATTGCAATCCTTGTCTAGCTCTGGTTGATAAGAAACAAAACAAAAGGAGAAACCTCTTTGAGGAGGCAAAAAAGTTGGACATATTGGTGAAAGACAGCAATGGAAATCCATACATGGTTCCAAACACAGCTTTTGATGTTGGAATGCTAGATCTAACGCACCCAAAAACTGCAACTTGGTTCAAGCAGATTCTACGAGAAATGGTGGACGATGGAGTTAGAGGATGGATGGCTGATTTTGGTGAAGGCCTTCCTGTTGATGCTGTTCTATATTCAGGTGAAGATCCTATTTCAGCTCATAACAGATACCCAGAACTATGGGCCAAAATTAACAGAGAGCTTGTGGAAGAATGGAAAAGTAGCTCCCTGGACAAGGTGAAGGAAGATGAAGACGAGGGCTTGGTTTTCTTCATGAGGGCTGGTTTTAGAGATAGCCCTAAGTGGGGGATGCTATTTTGGGAAGGAGACCAAATGGTCAGTTGGCAAACAAATGATGGAATAAAGAGTTCTGTTGTTGGCCTACTCAGCAGTGGAATTTCTGGCTATGCCTTTAATCACAGTGACATTGGAGGATACTGTACAGTAAACTTACCTATAGTTAAATATAGAAGAAGTGAAGAATTGCTTTTGCGGTGGATGGAGCTAAATTCTTTTACCACAGTCTTCCGCACCCATGAAGGAAACAAGCCATCATGCAACAGCCAGTTTTACTCAAACCACCAAACAATGTCACACTTTGCGCGTTCTGCAAAAGTATACAAAGCATGGAAATTTTACCGAATTCAACTGGTGAAGGAAGCTGCACAGAAAGGATTGCCCATATGTCGCCACCTATTTCTCCATTATCCTGATGATGAATGTGTGCATCGTTTGAGTTATCAGCAGTTCTTGGTTGGTTCTGAGTTCCTAGTGGTGCCTGTCCTTGACAAAGGAAAGAAAAAAGTTAAAGCTTATTTTCCATTGGGAGAGAGTAGCAGTTGGATCCATATCTGGACAGGAAAAGTGTTTTCCAAACAAGGACGTGAAGAATGGGTAGAAGCTCCAATAGGATACCCTGCTGTATTTGTTAAGGTTGGCTCCCAGGTTGGAGAAACCTTTTTGAATAACCTGAGAAGTTTAGGCATTCTTTAA 2637 0.4194 MAILKITKKHHKRFNNPFPSSVSTTIPYVQGSLFFNSKRVPSDQTFSIGTDFHLSWTSNNGGHLSISHLSHQTRPIWSTIPGQAFVSAALVDTEVEESRGSFLVKDKDVHLVCNHQTIEDIRVIEDISQFDHHLECEVADSPCVSQGLEKKSDAQEIHLPTLMITGRLFNMSKKSKRFQKHGIQATMQFEAKGPSVYARYWVLFNQKGNHEVGFQVKIEKPNFVSRNQVSKKASGVYQGFKRRLSNRKKRLDWCWYLSRPRGFVLVSSVEEEIGNLDIPKPEEFNRVWLTYASDENERFYGFGEQFSHMNFKGKRVPIFVQEQGIGRGDQPITLAANLISYRAGGDWSTTYAPSPFYITSKMRSVCLEGYDYTVFDLTRLDRVQIQIHGNSVEGRILHGNSPCELIERSTESIGRLPELPEWIISGAIVGMQGGTDAVRHIWDELRTYDVPVSAFWLQDWVGQRETLIGSQLWWNWEVDAQRYWGWKELIKDLSSQNIKVMTYCNPCLALVDKKQNKRRNLFEEAKKLDILVKDSNGNPYMVPNTAFDVGMLDLTHPKTATWFKQILREMVDDGVRGWMADFGEGLPVDAVLYSGEDPISAHNRYPELWAKINRELVEEWKSSSLDKVKEDEDEGLVFFMRAGFRDSPKWGMLFWEGDQMVSWQTNDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNLPIVKYRRSEELLLRWMELNSFTTVFRTHEGNKPSCNSQFYSNHQTMSHFARSAKVYKAWKFYRIQLVKEAAQKGLPICRHLFLHYPDDECVHRLSYQQFLVGSEFLVVPVLDKGKKKVKAYFPLGESSSWIHIWTGKVFSKQGREEWVEAPIGYPAVFVKVGSQVGETFLNNLRSLGIL* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1092 878 Gene3D glycosyl hydrolase (family 31) 242 398 - -
Gso3g1092 878 Gene3D - 807 859 IPR013780 -
Gso3g1092 878 CDD GH31_glucosidase_YihQ 414 752 IPR044112 -
Gso3g1092 878 Gene3D Glycosidases 401 806 - -
Gso3g1092 878 SUPERFAMILY Galactose mutarotase-like 284 402 IPR011013 GO:0003824|GO:0005975|GO:0030246
Gso3g1092 878 PANTHER SULFOQUINOVOSIDASE 29 876 - -
Gso3g1092 878 Pfam Glycosyl hydrolases family 31 397 862 IPR000322 GO:0004553|GO:0005975
Gso3g1092 878 CDD GH31_N 284 414 - -
Gso3g1092 878 SUPERFAMILY Glycosyl hydrolase domain 775 859 - -
Gso3g1092 878 SUPERFAMILY (Trans)glycosidases 405 773 IPR017853 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1092 295 850 Glycoside Hydrolase AT3G45940 24.411 6.86e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1092 - - gmx:100779005 1816.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1092 3 36035413 36040824 Gso3g1092 3 36035413 36040824 ECH