Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1060 ATGACAACCTTTGCATTCACTTCCTTGCTCCCACTTACAGTCTCATCACCATCTTCATCTTCCAAATTCTCAGCTTTTCATGCTATCAGAGCCTCATTAGATTCTGAGTATGTTGCCTCCCGACACACCCTTAGAAGGGAATTCTTGAAGGGTGTTGCTTTGATGCCTCTGCCACTTGTTGTGATGAGAGAACCACCCCCTTCACATGCTAGAGAAGTTGAGGTTGGCTCCTTCCTTCCACCCTCTCCCTCTGACCCTTCTTTCGTTCTCTTCAAGGCCACTCCCAAGGACACTCCAGCCCTTCGAGCAGGAAATGTGCAGCCATACAAGTTTATCCTCCCCCCGACTTGGAAACAGGCTCGTGTAGCAAATATATTATCTGGAAATTACTGCCAGCCTAAATGTGCAGAGCCCTGGGTGGAGGTTAAGTTTGAAGATGAAAAACAAGGAAAAGTTCAGGTTGTTGCTTCGCCTTTGATACGCCTTACCAACAAACCGAATGCATCAATTGAGGACATCGGGAGCCCAGAAAAACTGATTGCTTCTCTTGGGCCATTTGTCACTGGAAACACTTTGGATCCAGATGAGCTCCTTGAGACTTCTGTTGAAAAGATTGGCGATCAGACATACTACAAATACGTGCTCGAAACACCATATGCTCTCACAGGAACACACAATCTTGCAAAAGCAACAGCAAAGGGAAACACTGTTGTTTTGTTTGTGGTTAGTGCCAATGACAAGCAGTGGCAAACTTCTGAGGAGACTCTAAAGGCCGTGCTTAATTCCTTTGAAGTTTAG 798 0.4586 MTTFAFTSLLPLTVSSPSSSSKFSAFHAIRASLDSEYVASRHTLRREFLKGVALMPLPLVVMREPPPSHAREVEVGSFLPPSPSDPSFVLFKATPKDTPALRAGNVQPYKFILPPTWKQARVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNKPNASIEDIGSPEKLIASLGPFVTGNTLDPDELLETSVEKIGDQTYYKYVLETPYALTGTHNLAKATAKGNTVVLFVVSANDKQWQTSEETLKAVLNSFEV* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1060 265 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 86 265 - -
Gso3g1060 265 Pfam PsbP 108 265 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Gso3g1060 265 PANTHER - 30 265 - -
Gso3g1060 265 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 6, CHLOROPLASTIC 30 265 - -
Gso3g1060 265 SUPERFAMILY Mog1p/PsbP-like 104 265 IPR016123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1060 Gso-Chr3 35513455 35516288 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1060 - - gmx:100813771 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1060 3 35513455 35516288 Gso3g1060 3 35513455 35516288 ECH
Gso19g1064 19 38441586 38444547 Gso3g1060 3 35513455 35516288 GST