Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1058 ATGAGTGCAAAGACTGCAAAGGACGAGTTGCAGAAATCAATAGCAGATATGGAGATAGAGAAGAGCGAGGTGGCGGTGAAAGAAGAGACACGGAAACGCCAGCATCGTCGTGGAGGAATCCGAACATTGCCTTTCATCCTTGCAAATGAATTCTGTGATAGATTTGCAGTAGCTGGTTTTAATGGCAACTTGATAAGTTACCTTACCCAAGTGCTGAACATGCCATTGGTATCTGCCTCCAACATTCTCACAATCTTTGTTGGAACGGGTAGCTTCACCCCTCTTCTTGGTGCTCTCATTGCTGAGTCCTTTGCTGGCCGCTTTTGGACCATTACTATTGCTTCTCTTATCTATCAACTGGGATTGATAAGTTTAACAGTATCAGCTATACTACCCCATTTTCGCCCCCCACCATGTCCAACACAAGAGAATTGCCAAGAAGCCACATCCTCACAGCTGAGCATGCTCTACATCTCTCTCCTCCTCACATCTCTTGGATCCGGTGGCATTAGGCCTTGTGTTGTGCCCTTTCTGGGGGACCAATTTGACATGACAAAAAATGGTGTGGCATCTAGGAAATGGAACCTCTTCAATTGGTACTTTTTCAGCCTTGGATTGGCTTCTCTTAGTGCCTTGACCATTGTGGTTTACATTCAAGACAACACTGGCTGGGGTTGGGGCTTTGGCATACCAACTATTGTCATGCTTGTATCCATCATAGCCTTTGTGTTGGGCTCACCACTTTATAAGACTGAGAAACCAGAAGGGAGCCCTTTGGTTCGTTTGGCCCAAGTGATTGTGGCAGCTATAAAGAAGAGGAATGAGACTTTACCAAGTGATCCCAAGTTTTTGTACCAAGATAGGGACCTCGATGCTGCTATTTGTTTGGAAGGAAGGCTCTTACACACGGATCAATTTAAATGGTTAGACAAGGCAGCAATTGTCACAGGGGAGGATGCCAGAGACCCAAATGCACCACCAAACTTGTGGAAATTGGCCACAGTGCACAGAGTTGAGGAGCTAAAATCCATCATCAGAATCCTTCCAATTTCCTCATCAGGAATTTTACTCATAGCTGCATCATCACACCTTCCCAGCTTTGTGATTCAACAAGCTCGAACGATGGACCGACACCTCTCTCACTCATTCCAAATTTCCCCAGCCAGCATGTCCATTTTCAGTGTACTAACCATGATGACAGGAGTCATTGTATACGAACGCCTTTTCGTTCCGTTCATTCGCAGATTCACCAAGAACCCTTCAGCAATCACCTGCATACAAAGAATGGCAATAGGCTTTGTGATCAACACTATAGCCACATTGGTTTCAGCACCAGTTGAAATCAAGAGAAAAGCTGTTGCTGAAAAGTACCACTTATTGGATAGTCCAAGTGCAACTATTCCAATAAGTGTGTTCTGGTTGGTACCTCAGTATTGTCTTCATGGTTTGGCTGATGTTTTTATGTCTGTTGGACTCTTTGAGTTTCTCTATGATCAATCACCTGAAAGCATGAGAAGCAGTGCTACTGCTTTGTATTGTATAGTGATAGCACTTGGGAGCTATGCTGGTACATTTGTTGTGACACTTGTGCATAAGTATAGTGGCAGTAAGGAGAGGAATTGGTTGCCTGATAGGAACCTCAATAGGGGTAGATTGGAGTACTATTACTTGCTTGTAAGTGGGATTCAAGTGTTGAATCTGGTTTATTTTGGAATTTGTATTTGGTGTTACACTTACAAGCCCTTGGAAGAGATTGCTGAAGTGAGCATGGAAAAGGATTTGGAGTTGGAACAGGCCAATTCAAAGGTCTCATGTGTCAATTCGAAAGATGGTGGAGATGCTGAATAA 1848 0.4394 MSAKTAKDELQKSIADMEIEKSEVAVKEETRKRQHRRGGIRTLPFILANEFCDRFAVAGFNGNLISYLTQVLNMPLVSASNILTIFVGTGSFTPLLGALIAESFAGRFWTITIASLIYQLGLISLTVSAILPHFRPPPCPTQENCQEATSSQLSMLYISLLLTSLGSGGIRPCVVPFLGDQFDMTKNGVASRKWNLFNWYFFSLGLASLSALTIVVYIQDNTGWGWGFGIPTIVMLVSIIAFVLGSPLYKTEKPEGSPLVRLAQVIVAAIKKRNETLPSDPKFLYQDRDLDAAICLEGRLLHTDQFKWLDKAAIVTGEDARDPNAPPNLWKLATVHRVEELKSIIRILPISSSGILLIAASSHLPSFVIQQARTMDRHLSHSFQISPASMSIFSVLTMMTGVIVYERLFVPFIRRFTKNPSAITCIQRMAIGFVINTIATLVSAPVEIKRKAVAEKYHLLDSPSATIPISVFWLVPQYCLHGLADVFMSVGLFEFLYDQSPESMRSSATALYCIVIALGSYAGTFVVTLVHKYSGSKERNWLPDRNLNRGRLEYYYLLVSGIQVLNLVYFGICIWCYTYKPLEEIAEVSMEKDLELEQANSKVSCVNSKDGGDAE* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1058 615 Coils Coil 7 27 - -
Gso3g1058 615 Pfam POT family 108 535 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso3g1058 615 Gene3D MFS general substrate transporter like domains 12 584 IPR036259 -
Gso3g1058 615 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 25 591 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso3g1058 615 PANTHER NITRATE TRANSPORTER 1 25 591 - -
Gso3g1058 615 SUPERFAMILY MFS general substrate transporter 27 585 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1058 Gso-Chr3 35484258 35493062 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1058 48 583 Organic Solute Cotransporters AT1G68570 56.611 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1058 - K14638 gmx:100786998 1170.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1058 3 35484258 35493062 Gso3g1058 3 35484258 35493062 ECH
Gso19g1063 19 38426301 38431439 Gso3g1058 3 35484258 35493062 GST