Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1045 ATGGCTGTGACCATTGACCGACATCATGGATTGAAGCCATTTAGCCGATCCCAGAGGTGCAAGCTCCAATCCTACGGTCACCTTGATCCCAACATCATTGAACTTAACCAAACTGGTGGTGGTGCTGCTGCTCTTTCTTCTTCTCAACACTCCTTCGGATTAGCATCACTTCAAGCCGAAAACATTCACCGCAGTTTCTCCACTCCATGCCTCCCCCTAACCACACTGCTAGGAGGGGAAGCAGACCTCACTTCTTCTTCTTCTCATCCAAGGGTTGAGATTGTTCTTGGAAGTGGAGCTCCTCCAGTGAATGCTCTAGTTGTTGAGGTTGCCATAGCCATGGCCTCAGGTGTTCATCCTATACCCCTCCCTAGTGGCCTAGGTGGTGCCTATGTTTTCCGCAACCAAAACGGCAACAACATTGCCGTAGCAAAGCCAGTGGATGAAGAGCCTTTAGCCTTGAACAACCCAAAGGGCTTAGGGGGTCAAATGCTGGGCCAGCCCGGCCTGAAGAAATCGATTCGAATCGGCGAAACTGGTATCCGAGAGTTAGCCGCTTATCTTCTTGACCATGGAGGCCTTGCTGGTGTGCCTCCTACTGTTTTAGTCAAATTCTCTCATGCTGCATTCTTCGGTGCAGCTTCTTCTTGTTCTTCTTCTCACACGCCTAAAATTGCCTCACTCCAACGCTTTGTTAGTCATGGTTTTGATGCAGGAGAATTAGGCCCTTCTTTCTTCCCAGTTTCTTCTGTACACCAAATTGGGATCCTAGACATTAGGATTATGAACCTTGATAGACATGCTGGGAATATGCTTGTGATGAAACATGACCACAACAACAGTGGCTATGTTGATGGTGTTGCTGATCTTGTTCCCATTGATCACGGTTTTTGCCTACCTGAGTGGCTTGATGATCCTTATTTCGAGTGGCTGCACTGGCCACAAGCCTCTATTCCTTTCTCTGAGTATGAAATTGACTACATTTCCAAGCTTGATCCTTTTAGGGATGCTGAGGCTTTGAGAAACGAGCTTCCTTCGTCGTTGAGGGAGTCATCCATTCGCGTTCTTATTGTTTGCACCATCTTGTTGAAGCAAGCTGCCGCTGCTGGCCTTTGTCTTGCTGAAATAGGGCAAATGATGACTAGGAAGTTTTGTGGTGGTGAAGAGTCACGTAGTGAATTGGAAAACATTTGCTTCATGGTCAAGACTAGTGTAGTTCCTCGCGGTGGTGGTGACAACAATGATAACTGCAAAGACGAAGAAACTAATGATGATCAAGTATGTGATGAAGTTGTTGCTGGTGATGGCGGCATTATTTCTTTGGCTGACCTGAACCAAGGTGAATGGGAAGCGTTTTTGGAGGTTTTTAGTGAGCTTTTGCATGGAGTTTTTGAGGCTAAGAGAAGTAGTGCAAAAGCAAAAGTTGGAACATATAATTGA 1440 0.4646 MAVTIDRHHGLKPFSRSQRCKLQSYGHLDPNIIELNQTGGGAAALSSSQHSFGLASLQAENIHRSFSTPCLPLTTLLGGEADLTSSSSHPRVEIVLGSGAPPVNALVVEVAIAMASGVHPIPLPSGLGGAYVFRNQNGNNIAVAKPVDEEPLALNNPKGLGGQMLGQPGLKKSIRIGETGIRELAAYLLDHGGLAGVPPTVLVKFSHAAFFGAASSCSSSHTPKIASLQRFVSHGFDAGELGPSFFPVSSVHQIGILDIRIMNLDRHAGNMLVMKHDHNNSGYVDGVADLVPIDHGFCLPEWLDDPYFEWLHWPQASIPFSEYEIDYISKLDPFRDAEALRNELPSSLRESSIRVLIVCTILLKQAAAAGLCLAEIGQMMTRKFCGGEESRSELENICFMVKTSVVPRGGGDNNDNCKDEETNDDQVCDEVVAGDGGIISLADLNQGEWEAFLEVFSELLHGVFEAKRSSAKAKVGTYN* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1045 479 Coils Coil 474 479 - -
Gso3g1045 479 Pfam Phosphatidylinositol 3- and 4-kinase 127 376 IPR000403 -
Gso3g1045 479 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 117 413 IPR000403 -
Gso3g1045 479 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 435 476 IPR044571 -
Gso3g1045 479 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 420 IPR044571 -
Gso3g1045 479 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 1 420 - -
Gso3g1045 479 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 435 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1045 Gso-Chr3 35230760 35238430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1045 1 437 Acyl Lipid Metabolism Gene Families AT2G40850 55.809 1.86e-157 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1045 - - gmx:100782931 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1045 3 35230760 35238430 Gso3g1045 3 35230760 35238430 ECH
Gso19g1059 19 38329797 38333781 Gso3g1045 3 35230760 35238430 GST