Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1040 ATGGCATCATCCGAGAACGTAGCCAGCATTGAGCCATGTATGCTTCGTCCCCCTGTCACCGATTCATGGCTCGCAGAGTTCTTCGCTCGTGACGCCGATGCCTTAACCAAGGCTCTTCAGAAGTCTCTCTCCGGTACTGTCTTGCCGGACGAGGAAAACTACTTTTCTCCCTTTCTGCCCAAGTCAGACCCCGCCGTCGCCACCCCCACCGTCTCCAGCCTCTCCGGCTCCGATCAGGACTCGGCGCCGCGCCGCCGCGCGCCGCTTCCGCCGTCCGGGAAGATCTCCAAGAGGAAGTCCCGCGCCTCGAAGCGCTCGCAGACGACGTTCATCACGGCGGACCCCGCCAACTTCCGACAGATGGTGCAGCAGGTCACCGGCGTGCGGTTCGGCGGCGCCGGCCAGCCAATTGCGCCGGCGGCGGGGGTTGTGAAGCCCGAGCCGCAGCGTGCCTCGGGCCTTGCCAGGTTCCCCGCCGGCGCGGGGTGCCTGCCGACGCTCGACACGTCGGCCTTCCTGCTGGACCATCACCAGCAGGTGGTGGGGCCCTCCTCTGTTAACTCTGGGCCTGCCACCGGGCTTTCTGGGCCCGGCCCGCTCCCCTTCGCCCAACCCCTCCTTGACGCTTCCTTCGCCTCCGCAGGGTTAGATTTTGACACCTTCTCCAGCTTCCCCACTCTCGAGTCGTGGAAAGTCATGTGA 702 0.6538 MASSENVASIEPCMLRPPVTDSWLAEFFARDADALTKALQKSLSGTVLPDEENYFSPFLPKSDPAVATPTVSSLSGSDQDSAPRRRAPLPPSGKISKRKSRASKRSQTTFITADPANFRQMVQQVTGVRFGGAGQPIAPAAGVVKPEPQRASGLARFPAGAGCLPTLDTSAFLLDHHQQVVGPSSVNSGPATGLSGPGPLPFAQPLLDASFASAGLDFDTFSSFPTLESWKVM* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1040 233 Pfam VQ motif 105 127 IPR008889 -
Gso3g1040 233 PANTHER VQ MOTIF-CONTAINING PROTEIN 3 233 IPR039609 -
Gso3g1040 233 MobiDBLite consensus disorder prediction 66 80 - -
Gso3g1040 233 MobiDBLite consensus disorder prediction 54 108 - -
Gso3g1040 233 PANTHER CALMODULIN-BINDING PROTEIN 25 3 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1040 Gso-Chr3 35160260 35161411 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1040 - - gmx:100782392 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1040 3 35160260 35161411 Gso3g1040 3 35160260 35161411 ECH
Gso19g1053 19 38251615 38252767 Gso3g1040 3 35160260 35161411 GST