Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0988 ATGGCTCAAGCAATGGCATCAATGACTAGCTTACGTGGTTCCTCTCAGGCTGTGTTGGAAGGTAGCCTTGGCTCCACACGCTTGAATGTGGGGAGTGGAAGCAGGGTGGCCTCAGTCACACGTGCAGGGTTCACAGTTAGAGCACAGCAACAACAAGTGAATGGTGGTGAGGTACAAAGTAGCCGTAGGGCAGTGCTTTCACTTGTTGCTGCTGGTTTGACCACTGGCTCTTTTGTTCAAGCTGTGCTTGCTGATGCCAAACCTATCAAAGTTGGACCACCTCCCCCACCTTCTGGCGGATTACCTGGAACATTGAACTCAGATGAACCAAGAGACCTTAAGCTGCCATTGAAAGATAGGTTCTTCCTTCAACCATTGTCTCCAACTGATGCTGCACAAAGGGCAAAGGAATCAGCCAAGGAAATTGTTGGCGTTAAGAAGTTGATTGAAAAGAAGGCTTGGCCATATGTTCAGAATGATCTGCGTCTCAGGGCCGAGTATCTGCGCTTTGATCTCAACACTGTCATTGCTGCAAAGCCTAAGGATGAGAAGAAATCACTCAAGGAACTCACTGGCAAGCTCTTCCAGGATATCAGCAATCTGGATCATGCTGCAAAAATTAAGAGCAGCCCGGAAGCAGAGAAGTACTATGCTGCTACTGTATCTTCTCTGAACGATGTCCTTGCCAAACTTGGTTAA 699 0.4793 MAQAMASMTSLRGSSQAVLEGSLGSTRLNVGSGSRVASVTRAGFTVRAQQQQVNGGEVQSSRRAVLSLVAAGLTTGSFVQAVLADAKPIKVGPPPPPSGGLPGTLNSDEPRDLKLPLKDRFFLQPLSPTDAAQRAKESAKEIVGVKKLIEKKAWPYVQNDLRLRAEYLRFDLNTVIAAKPKDEKKSLKELTGKLFQDISNLDHAAKIKSSPEAEKYYAATVSSLNDVLAKLG* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0988 232 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 5 232 - -
Gso3g0988 232 SUPERFAMILY Oxygen-evolving enhancer protein 3, 121 231 IPR023222 -
Gso3g0988 232 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 37 232 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Gso3g0988 232 Gene3D - 85 232 IPR023222 -
Gso3g0988 232 MobiDBLite consensus disorder prediction 88 110 - -
Gso3g0988 232 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 5 232 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0988 Gso-Chr3 34088427 34090541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0988 K08901 - gmx:100499794 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0952 7 11665549 11667555 Gso3g0988 3 34088427 34090541 GST