Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0975 ATGAGTGAAGAGTCTCATTCTAATGTAGAGGCTATGGATCTCTTACGTCAGTTTGAGGATATTCTTGAATCTGATGCTCTAATTGACGAGCTGGGCTTCATTCATCCATCCCAATTTGCCTTGCTAAAGGAAGAATCCTACATTTCGTCTAATTTATCTGATGAAGCTATCCATCAATCAGCAGACGGGGTAGTGATCTCTGAGGAATCTTCCAAACAAGACAACCTATATTTCTGGAACAGAGATCATAAATTGGGAATTTCAACTCATGTTCTTCTACCGTTATATAGAGCTGCTAAACACGTGTTTATGACTACGTTAAAACAATACAGGATGTGTGACAATCAATCTGACAAAGTTGGAATTTGCTTACCTGCTTCTTCTTCTTCTTGTGATCATCTTGAAAGTATGCTTCTGAGACACAGCAAGTCTCTTCTGCTGCTAAGCTGTGACTTTTTGACAGCTTGGAATTGCAGAAAGTTAATAGTGTCCAAGAAGAAGCTCTCAATGTTTGTAGATGAACTTCTCCTGTCAGAACTTGTGCTCTCATATTCACCCAAAAGCGAACAAGCTTGGAATCATAGGCGGTGGGTGATCAAGTCAATCTCTGCAAACTGTTCAAATTTCAATGAGATTTTGGGAAAAGAATCTGAGCTGGTGGAAAAAATAGCTGAGAGATCAAAAATGAATTATCGTGCATGGAATCACCGTTGCTGGTTAATCTCATACATGACTATCGAACAGGTTCTGTATGAATTAAAGAAATCCAGAAGCTGGGCTGCACTGCATGTTGCTGATAATTGTTGTTTTCATTATCGCAGACGTCTATTACTGAAATTTATGGAGAACCAAAATTCTGTGGAAGAAACTGTATCTTATGGTCATAATGCTGATATTGTCCAAGCCTTGAAGGATGAACTTGATTGGAATGAAACATTGATAAAACGTTATGTTGGAAGAGAGGCTCTATGGCTTCATCGTCGCTTCCTTTCCATGTGGATACTTGATTCCGGTGATGCATCCTACCACTCCAAGGAGGCAATCAGCATGCATCATGACTTTGGCACCTTTCTGCAGAATGAATTATGTCTTCTCCATTCCTGCTCAACTTTTGTTGATGATTTTGTGGATGTCCAAGCACAAGCTGCATATTCTGCTTGTTACATACTGTGGTTAAAAGTGCAAATCGCCAAGCCTCTGGAGAGTAAGCTCTTAGAGAAGATAAAAGATGTAGATCTGAAGACCTTGTTGGATAAGTCATGCCCAGAGAGATCCTCACTCTTCAATTACTTTATGAACTAG 1302 0.3963 MSEESHSNVEAMDLLRQFEDILESDALIDELGFIHPSQFALLKEESYISSNLSDEAIHQSADGVVISEESSKQDNLYFWNRDHKLGISTHVLLPLYRAAKHVFMTTLKQYRMCDNQSDKVGICLPASSSSCDHLESMLLRHSKSLLLLSCDFLTAWNCRKLIVSKKKLSMFVDELLLSELVLSYSPKSEQAWNHRRWVIKSISANCSNFNEILGKESELVEKIAERSKMNYRAWNHRCWLISYMTIEQVLYELKKSRSWAALHVADNCCFHYRRRLLLKFMENQNSVEETVSYGHNADIVQALKDELDWNETLIKRYVGREALWLHRRFLSMWILDSGDASYHSKEAISMHHDFGTFLQNELCLLHSCSTFVDDFVDVQAQAAYSACYILWLKVQIAKPLESKLLEKIKDVDLKTLLDKSCPERSSLFNYFMN* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0975 433 Gene3D Protein prenylyltransferase 107 420 - -
Gso3g0975 433 SUPERFAMILY Protein prenylyltransferase 89 360 - -
Gso3g0975 433 Coils Coil 431 433 - -
Gso3g0975 433 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 170 204 IPR002088 GO:0008318|GO:0018342
Gso3g0975 433 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 25 393 - -
Gso3g0975 433 Pfam Protein prenyltransferase alpha subunit repeat 173 200 IPR002088 GO:0008318|GO:0018342
Gso3g0975 433 Pfam Protein prenyltransferase alpha subunit repeat 303 330 IPR002088 GO:0008318|GO:0018342
Gso3g0975 433 Pfam Protein prenyltransferase alpha subunit repeat 216 244 IPR002088 GO:0008318|GO:0018342
Gso3g0975 433 PANTHER PROTEIN PRENYLTRANSFERASE ALPHA SUBUNIT REPEAT-CONTAINING PROTEIN 1 25 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0975 Gso-Chr3 33967315 33975902 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0975 K14137 - gmx:100797408 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0963 7 11857708 11867427 Gso3g0975 3 33967315 33975902 GST