Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0954 ATGGGTTGCACGGCGTCGAAACTCGACAACGAGGAAACCGTGAGGCGCTGCAAGGAACGGCGTCGTTTCATGAAAGATGCCGTTTACGCGCGCCACCACCTTGCGGCGGCGCACTCTGACTACTGCCGCTGCCTCCGCCTCACCGGCTCCGCTCTCTACACCTTCGCCGCCGGCGAACCCCTCGCCGTCTCCGACGACACTCCCGCCGTCATCCTCAAAACCACTACCACCGCCGCCGCCGATAATCCCCAAACGCATCCTCCTCCTCCTTCCGCCGCCGCAACAAGCCCCAAACTCCCTCGCATAATAACCTCCGACGTCACGCGCCGCCGAAAACCGCCATCGAAGCTTCCTCATATACTCTCTGAATCGAGCCTCTGTTCCACGCCTGGAAGCGAGTATTCAAACTTCTTCGCCACCGCACCTACTTCGAAACCACCACATCCTCCTCCTCCTTCCGCCGCCGCGCGTCGCCGCAAGCCTACGCCGAAACTCCCTCACATCCTCTCCGAATCGAGCCTCTGTTCCTCGCCGCGAAGCGAGTATTCGAATTTCTTCCCCAGGGCGCAACAAGTTCAATCCACCACGCCTACTTCGCAAGCCTCTTCGGTTTGGAATTGGGAGAATTTCTATCCTCCCCCGTCTCCTCCAGGCTCCGATTACTTCCGCCAAAAAAATCACAAATCGGAAACGCCGAATCTCGAAACGTCGGAATCGGAATCTGAATCGACCTATAATCCGTTCGGTTCAAAAGTTCAACGTATACGCAAAATCGAAAACATTACTAACGTTGATTCAATTTCACAGCAACAAAACGCGGAACGTGAAGTTTTGGAATCGGAATCGGAATACGGATACTTACGTGAACCGGTTCAGACGGAGCGTGAGGAGGTTCTATGCAGCGAGTGGGAGGACCGTTACAGTTCCTCGAGTTCGTCGTCGGAGGAGGAGGAAGGGATCGCCAAAAATAGATCGCCGGCGAAGGCGGAATCTGACGCCGGCGGCGATGCTCCGGAGAAGAAGGATGAGAAGGTTGATGATGACGTGGCGGAGGCGGCTAAGGTTGCCGTGAGGCATAGGGATTTGAAGGAGATAGTGGAAGCGGTTAGGGAGAATTTTGAGAAGGCTGCGATGGCCGGAGATCAGTTATCGGAGATGCTCGAAGTTAGCAAAGCGCACCTTGATCGGAGTTTCAAGCAATTGAGGAAAACACTTTACCATTCAAATAGTATACTGAGCAACCTGAGTTCGAGTTGGACCTCTAAACCGCCGTTGGTGGTTAAGTACCGGTTCGACGCCGGTTCGTTGGACGGACCGGGAGGTTCGAAGAGTCTGTGTGCTACTTTGGAACGGCTTTTAGCTTGGGAGAAGAAGCTGTATCAGGAAGTGAAGGCTAGAGAAGGTGTGAAGATTGAGCATGAAAATAAATTATCAGCACTGCAAAGTCAAGAATGCAAAGGGGGTGATGAAGCAAAGCTAGATAAGACCAAGGCCTCCATAACAAGGTTGCAGTCATTAATTGTTGTCACATCTCAAGCCGTGTCTACCACCTCAGCTGCCATTAATGGCCTTAGGGACTCTGATCTTGTTCCTCAGCTTGTTGAGCTCTGTCATGGAATCTTATACATGTGGAAGTCAATGCATCAGTACCATGAAATTCAAAGCAACATTGTGCAGCAAGTCCGTGGCCTTGTGAACCAATCATCCAAAGGTCACTCAACATCTGAATCACACAAGCAGGCAACTCGTGATCTTGAATCAGCTGTGTCAGCTTGGCACTCCAGTTTCTGCCGCCTCATAAAGTTTCAACGTGACTTCATCCTGTCTCTACATGGCTGGCTCAAGTTGAACCTTATTCCAGTCAACAATGACAACAACAGCAGCAGTGAACCATCTGGTGTGTTTTCTTTCTGTGATGAATGGAAACTAGCCCTTGACCGTGTTCCGGACACAGTTGCTTCCGAAGCAATCAAAAGCTTCATCAATGTTGTCCATGTGATATCTGTCAAGCAATCTGAAGAGCTCAAGATTAAGAGGAGAACTGAGAATTCTTCCAAGGAACTTGAGAAAAAATCTTCATCTCTGAGAAGCATAGAAAGGAAGTTTTACAGCTCCTATTCTATGGTAGGTATTACCCCTCCTGAGTCAGGGCCTGGTAATGGACAAGGCTTGGATGCAAGAGACCCTCTTGCTGAAAAAAAAATGGAACTAGCAGCGCACCAAAGGCGCGTCGAAGATGAAATGGTGAGGCATTCAAAGGCTGTTGAGGTGACTAGAGCCATGACACTCAACAATCTACAGACAGGCTTGCCTGGAGTGTTTCAGGCATTGACCAGTTTTTCTACTTTGTTCACTGAGGCTCTTGAGTCAGTATGTAGCCGTTCATATGCCATCAAGTAA 2400 0.5042 MGCTASKLDNEETVRRCKERRRFMKDAVYARHHLAAAHSDYCRCLRLTGSALYTFAAGEPLAVSDDTPAVILKTTTTAAADNPQTHPPPPSAAATSPKLPRIITSDVTRRRKPPSKLPHILSESSLCSTPGSEYSNFFATAPTSKPPHPPPPSAAARRRKPTPKLPHILSESSLCSSPRSEYSNFFPRAQQVQSTTPTSQASSVWNWENFYPPPSPPGSDYFRQKNHKSETPNLETSESESESTYNPFGSKVQRIRKIENITNVDSISQQQNAEREVLESESEYGYLREPVQTEREEVLCSEWEDRYSSSSSSSEEEEGIAKNRSPAKAESDAGGDAPEKKDEKVDDDVAEAAKVAVRHRDLKEIVEAVRENFEKAAMAGDQLSEMLEVSKAHLDRSFKQLRKTLYHSNSILSNLSSSWTSKPPLVVKYRFDAGSLDGPGGSKSLCATLERLLAWEKKLYQEVKAREGVKIEHENKLSALQSQECKGGDEAKLDKTKASITRLQSLIVVTSQAVSTTSAAINGLRDSDLVPQLVELCHGILYMWKSMHQYHEIQSNIVQQVRGLVNQSSKGHSTSESHKQATRDLESAVSAWHSSFCRLIKFQRDFILSLHGWLKLNLIPVNNDNNSSSEPSGVFSFCDEWKLALDRVPDTVASEAIKSFINVVHVISVKQSEELKIKRRTENSSKELEKKSSSLRSIERKFYSSYSMVGITPPESGPGNGQGLDARDPLAEKKMELAAHQRRVEDEMVRHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSTLFTEALESVCSRSYAIK* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0954 799 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 1 799 - -
Gso3g0954 799 MobiDBLite consensus disorder prediction 143 157 - -
Gso3g0954 799 Pfam Protein of unknown function (DUF632) 362 665 IPR006867 -
Gso3g0954 799 MobiDBLite consensus disorder prediction 215 248 - -
Gso3g0954 799 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Gso3g0954 799 MobiDBLite consensus disorder prediction 301 347 - -
Gso3g0954 799 PANTHER UNCHARACTERIZED 1 799 - -
Gso3g0954 799 MobiDBLite consensus disorder prediction 77 162 - -
Gso3g0954 799 MobiDBLite consensus disorder prediction 333 347 - -
Gso3g0954 799 MobiDBLite consensus disorder prediction 301 325 - -
Gso3g0954 799 MobiDBLite consensus disorder prediction 121 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0954 Gso-Chr3 33506692 33513503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0954 1 92 Acyl Lipid Metabolism Gene Families AT2G27090 32.039 2.80e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0954 - - gmx:100792843 1449.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0954 3 33506692 33513503 Gso18g1805 18 50523113 50530067 PCT
Gso3g0954 3 33506692 33513503 Gso9g1993 9 44360434 44366183 PCT