Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0950 ATGGGGAACGAGGAAGAAGAAGAAGAAGTGGTGGCTGAAGTTGAAGCAGTGGAAGCCGTGTATGGAACCGATTGCGTCCTTCTCCGTTCATTCCCTCCCCATTTCCACATCTCTCTCAAACCCAGAACCGCTGATGTTTCATCCCAACAGTTTGTGGAAGCTGTTCTGGAGATACAAGCAAGCTCACAGTATCCAAAAGAACCACCTTCTGTTGATCTTGTGGATTGCAAGGGTCTGGATGAACAAAGAAAGAAGTATCTATTAAATTGCATACAGAGTAAAGCCTATGAGCTCTCCCCTTGTTTAATGCTTGTAGCTCTATGTGAGGAAGCTGCAGAGAAACTTTCATCTATGAATCATCCTGATGGTGATTGTCCGTTGTGTTTATTCCCATTGGTCCCAGAAGATCAGGAAAGTGGAACCTTGCCTTTTATGAAGTTAATGTCTTGCTTTCATTGCTTTCACAGTGAATGTATCATTAGATGGTGGAAATGGCTTCAAAATTCTAACAAAGTAGACTCTTCTAATACAGATAGTGCAGCTGCACATCGTAACCAAGATAATCCTAAGAAAACGGAAGAGAGTGTTGGAAACTGCCCAGTCTGTCGCAAGCCTTTTCTTGCCAAGGATTTGGACCATGTGCTTGCTCTAGTTGGTTCATATTCTTCCCAATTGAGTTCAGATAATGAAGAACTCAACGAAGAGGAAAAGCTCCTTCAATCAGAGGATGAGATCAATAGGAGACAGAAATATGAAGCCATCTTAAATTTACAGAAGGAGAACAGTGGTTTGATTGAACCCAAAAAAGAGATGGTAATATTGCCCGGTATGTATCTTCCACAACCAGTAGCAATGCCCAGCTCCACACCAACCAAGGAATCTGATGAGCCGCAACAAAAAGATCCACCTGCAGTTGTGCCAGAAAAACATGCAGGTGGGACATCCAACAGCAGCATACCTAGTTCTAGCAGGCAGAGGAATTTTGGAGCAAGGAGACAGAAAGCAAGAAGTGATAACCACTCTAGTTCAACCGCAAGAAATCCAAGAAAACCAGCCCAACAGCAGTGGGTAAGAAGAGATAATCCTAGCAATAAGCCATAG 1101 0.4314 MGNEEEEEEVVAEVEAVEAVYGTDCVLLRSFPPHFHISLKPRTADVSSQQFVEAVLEIQASSQYPKEPPSVDLVDCKGLDEQRKKYLLNCIQSKAYELSPCLMLVALCEEAAEKLSSMNHPDGDCPLCLFPLVPEDQESGTLPFMKLMSCFHCFHSECIIRWWKWLQNSNKVDSSNTDSAAAHRNQDNPKKTEESVGNCPVCRKPFLAKDLDHVLALVGSYSSQLSSDNEELNEEEKLLQSEDEINRRQKYEAILNLQKENSGLIEPKKEMVILPGMYLPQPVAMPSSTPTKESDEPQQKDPPAVVPEKHAGGTSNSSIPSSSRQRNFGARRQKARSDNHSSSTARNPRKPAQQQWVRRDNPSNKP* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0950 366 SUPERFAMILY UBC-like 6 115 IPR016135 -
Gso3g0950 366 MobiDBLite consensus disorder prediction 174 196 - -
Gso3g0950 366 Coils Coil 222 242 - -
Gso3g0950 366 MobiDBLite consensus disorder prediction 311 328 - -
Gso3g0950 366 PANTHER RING FINGER PROTEIN 25 5 359 IPR039133 GO:0061630
Gso3g0950 366 SMART RWD2001b 12 118 IPR006575 GO:0005515
Gso3g0950 366 Gene3D Ubiquitin Conjugating Enzyme 1 120 IPR016135 -
Gso3g0950 366 ProSiteProfiles RWD domain profile. 12 118 IPR006575 GO:0005515
Gso3g0950 366 SMART ring_2 125 202 IPR001841 -
Gso3g0950 366 ProSiteProfiles Zinc finger RING-type profile. 125 203 IPR001841 -
Gso3g0950 366 Pfam RWD domain 8 114 IPR006575 GO:0005515
Gso3g0950 366 SUPERFAMILY RING/U-box 119 209 - -
Gso3g0950 366 MobiDBLite consensus disorder prediction 282 366 - -
Gso3g0950 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 217 IPR013083 -
Gso3g0950 366 MobiDBLite consensus disorder prediction 340 366 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0950 K10640 - gmx:100791789 706.057