Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0943 ATGGCTTCACTTTCCCTCTCTCTCTCCACACCAACAACACCAACCTCACTCTCCTTCGGATCATCCTCCATCTTCTTCTCTTCACACCAATTCCACACACACAATAATTCTTTCAAGTCCAACAGCTTTCCCGTTTTACCCTCCAAAAAACCCCTCTCCATTTCCTGCAAGGCCTCCCCTCCTCTTCCCGTCCTCAACTTCTCCGGCGAGAGGGTCGGCGAGTCCTTCCTCGACCTCCGCTCCGCCCCTCCCGACACCGCCCGAGCCGTCGTCCACCGCGCCGTCGTCACCGACCTCCAGAACAAGCGCCGCGGCACCGCCTCCACCCTCACCCGCGGCGAGGTCCGAGGCGGCGGCCGGAAGCCCTTCCCGCAGAAAAAAACCGGTCGCGCCCGCCGCGGCTCCAACCGCACGCCCCTCCGCCCCGGCGGAGGCGTCATCTTCGGCCCGAAGCCCCGCGACTGGTCCATCAAGATCAACCGCAAGGAGAAGCGCCTCGCCATCTCCACCGCTGTTGCCAGCGCCGCCGCCAGTGCCGTCGTGGTGGAGGACTTCGCAGCGGAGTTCGCCGAGAAGCCGAAGACGAAGGAGTTCATCGCGGCGATGAAGCGGTGGGGGCTCGACCCGAAGGAGAAGGCGATGTTCTTGATGACGGAGGTGCCGGAGAACGTGAGGCTATCGAGCAGGAACATTGGGACCTTGAAGATGCACACGCCGAGGACGCTGAATTTGTATGATATTCTTGATGCGGATAAGCTTGTGCTCACGCAGGGTGCTGTGGATTACTTGAATCAGAGGTATGGGGGTGATTATCAAGGGAGTGATGATGAAGATGAAGAAGAAGAAGAAGAGGGATATGAAGAGGGTGAGGAGGAAGGTGTAGTGGATGGTGAAGAAGGACCTGACGCAGGGGATAGTGATGTGGTAAATTGA 933 0.5916 MASLSLSLSTPTTPTSLSFGSSSIFFSSHQFHTHNNSFKSNSFPVLPSKKPLSISCKASPPLPVLNFSGERVGESFLDLRSAPPDTARAVVHRAVVTDLQNKRRGTASTLTRGEVRGGGRKPFPQKKTGRARRGSNRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTAVASAAASAVVVEDFAAEFAEKPKTKEFIAAMKRWGLDPKEKAMFLMTEVPENVRLSSRNIGTLKMHTPRTLNLYDILDADKLVLTQGAVDYLNQRYGGDYQGSDDEDEEEEEEGYEEGEEEGVVDGEEGPDAGDSDVVN* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0943 310 Pfam Ribosomal protein L4/L1 family 87 265 IPR002136 GO:0003735|GO:0005840|GO:0006412
Gso3g0943 310 SUPERFAMILY Ribosomal protein L4 62 268 IPR023574 GO:0003735|GO:0005840|GO:0006412
Gso3g0943 310 MobiDBLite consensus disorder prediction 273 303 - -
Gso3g0943 310 TIGRFAM rplD_bact: 50S ribosomal protein uL4 87 264 IPR013005 -
Gso3g0943 310 Hamap 50S ribosomal protein L4 [rplD]. 67 268 IPR013005 -
Gso3g0943 310 MobiDBLite consensus disorder prediction 266 310 - -
Gso3g0943 310 MobiDBLite consensus disorder prediction 102 147 - -
Gso3g0943 310 Gene3D - 62 271 IPR023574 GO:0003735|GO:0005840|GO:0006412
Gso3g0943 310 PANTHER 50S RIBOSOMAL PROTEIN L4 5 284 IPR013005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0943 Gso-Chr3 33279277 33281942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0943 K02926 - gmx:100790380 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0975 7 12312749 12314539 Gso3g0943 3 33279277 33281942 GST