Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0891 ATGGCATCATCAGATGAAGAAGGTGAAATTATCCCAGATCTTGTTGATAGTTATTGGTTTGAAAATGAAAAGGAAGAGTTTGTGTCACTTTCTAGTTTGACATTACTGTGGAGCATTAGTGAGACCGTATGTGGCTTGAAAGCACAAGTATTTTTGCGTGGCACCACTGATGATGACGGTCTCCAGACAATTCACAAACAAATAATCGGATGGAGATTTGAACTTCCCTCTGGGAAGCCTGAGATTTCAGTGCTTTCAAAGGACAAAAGCTGGATAACTCTCCAAAGACCAAGAAAGTGTTTTGAGAGTACAATTAAGGCAATCTTGGTCACAGTATATTGTTTACATTTTGTGAAATGGAATCCAGAGGAATCTCAAATATGTATTTGGGTCAAAATGCTGAAGGCCTTTAGCTCATTTGATATTGTGCCATCCGAGAATGATCTTCTTAGTAATGTGACATTGATTAGAGAAGCTGTTGAAAGGGATAAAGATTTAACAAAATCCAAGTATCTGCTTGATTTCATGGAAAGGGCATGTTCAAATGAAGGCTTCCATGAGTCCAGTAATGTTCTTCCTACAAAGAAATCAAAGTTTATTGTGGACTCCGAGGATGAGGAGAATGACCAATCTGATGTTCTAACTACAAAGAAATCAAAGTTTATTGTGGACTTTGAGGATGGGGAGAATGACCAATCTGATGTTCTTCCTACAAAGAAATCTAAGTTTATTGTGGACTCCAAGGATGAGGAGAACGACCAATCTGATGTTCATCCTACGAAGAAATCTAAGTTTATTGTGGACTCCGAGGATGAGGAGAATGACCAATCTGATGTTCTTCCTACAAAGAAATCAAAGTTTATTGGGGACTTTGAGGATGAGAAGAATGGCCAATCTGATGTTTTTCCTACAAAGGAATCAAAGTTTATTGTGGACTCAGAGGATGAGGAGAATGACCAATCTGATGGTGAACTCGATCCCGATGGAGAGCAAAATATTGGATATGATACTGTTTGTGCAATATGTGATAATGGTGGTGAAATACTTCCTTGTGAAGGAAGATGTCTGAGATCCTTTCATGCAACCAAAGAGGCTGGTATAGATGCAGTTTGTGAATCTCTTGGCTACACTAGTGCTCAAGTTAAGGCCTTTCCAAACTTTTACTGTCAAAATTGTAAATATAAGCTGCACCAGTGCTTTGCATGTGGCAAACTGGGTTCATCTGATGTATCATCTAAAGCAGAGGTATTTCCTTGTGTTACTGCAAATTGTGGTCACTACTACCATCCTGAATGTGTTGCAAGACTTCTCTCCCCTAGCATTGACACTGAACAAGAGGAAATGAGAAAGAAAGTTGCCATGGGAAAAGCATTTGTCTGTCCTCTTCATATATGTTCTTTATGTAAAAAAGGTGAAAATAAAAATTTTCATGATTTGCAATTCGCAATATGTAGACGCTGCCCTAAAGCTTACCACAGAAAATGCTTACCCAGGGAAATTTCCTTCGTATTTGATAATGATAAGAGCATTGAGCAGAGGGCTTGGGATGGTCTACTTGACCATCAAATTTTGATATATTGCCTGGATCATGTGATAGTTAGGGAACTCGGGACTCCTGCTAGAGACCATCTGGTATTTCCTGATGTGAAAGTCAGAAAGAAGGTATTGAATTACAAATTATTAGGCAATGGAAAAAATACTCTAAATTTGGGGCAAAGTTTTGAAGATCTTCATCCTAAGAAAACATTGGTACCAAACCTTGTCACAAAGCGAAGTGTTAGCATCCAAGATGGTGATTCTGCCAAAGATATGGAGAAAATATGTTTAAAGAAAGATAAATGTTTCTCAAGTGGATCAGTCAAGTTTGATAGGGATAGAAAATATTTGAAGGTTAAAAATCTGTCTGTGTTAAATAGTTCCTTACAAAGGCCTGCAAAAAAGTTGCCTTTGAAAATTGCTAACTTGTCCTGTAATTCAAGATTACGTGAAGATAAATCTTTGCAGAAAAAAATGGTTGATGGAAGTATTGGAAAAACAGGCATAGAGAAGCCTCTAAAAAAAATCCAAACTTCACTTGACGCTAACAACGCTGAAATGGAAAATAGTATTTTGTCTTTAATGAAAGATACCATGTCTACATTTAATGAGGAAGAATTCAAAAAGAACCATCAAGCCTTCTCTACAACTTCTGGTTTCACCGAACCTGTATCTCATCATAAGAACCTTACTCAAGGAAAAGTAGAAGGTTCAGTTAAGGCTATTCAAACAGCTTTGCAGAGGTTAGAAGAAGGTGGTAGTATTGAAGAAGCAAAAGCTATTTGTGATCCAGGGGTCCTCCATCAGCTTTTTATTTGGCAGAAACAGCTCAAGGTCTATCTTTCACCTTTTCTTCATGGTATGCGGTATACTTCCTTTGGTCGCCATTTCACTAAAATAGACAAGCTGAAGGAGGTTGCTAATAGGCTTCATTGGTATGTTCAGAATGGAGACACGGTTTTGGACTTCTGTTGTGGTTCTAATGACTTCAGTCGTCTAATGAAATCAAAGCTTGAAGAGATGGGGAAGTCATGTTCATTTAAGAACTATGATTTATTCCAACCCAAGAATGATTTCAACTTTGAAAAGAGAGATTGGATGAGTGTCAATGCAGAAGAATTACCCAACGGTTCTCAACTTATCATAGGGCTGAATCCTCCTTTTGGGGTTAAGGGTTCTCTTGCTAACAAATTTATTAACAAGGCGTTGACATTTAAGCCAAAACTCCTTATACTTATTGTGCCAAAAGTAACTAAACGACTTGACAGAAAGAAAGAAGGATATGATTTAATTTGGGAGGATGATGAGATGCTTTCAGGAAAGTCATTTTATCTACCTGGTTCCGTTGATACACGCGACAAGCAATTGGAAGACTGGAACTTGAAGCCACCACCTCTCTACCTTTGGAGTCGCCCTGATTGGACCACTAAGCACAGGGAAATTGCTCAAAAGCATTGTCATATCAAGGAAGAATATGATGTGCATGTGAATGGAAAAGAAGTGAAGAATTATCTTATGGAGGAGAATCATGAGTGTTATCAGAATTGCCGTGGCTTACATGTCCCTGGGAATGTTTTGAGCATATTTGATGGTATTCCAAATGATAATGGTGCCAATGCACCTGAGGAAGGTGCAACTAGCAATGCCTCGGTCTGGTGA 3195 0.3834 MASSDEEGEIIPDLVDSYWFENEKEEFVSLSSLTLLWSISETVCGLKAQVFLRGTTDDDGLQTIHKQIIGWRFELPSGKPEISVLSKDKSWITLQRPRKCFESTIKAILVTVYCLHFVKWNPEESQICIWVKMLKAFSSFDIVPSENDLLSNVTLIREAVERDKDLTKSKYLLDFMERACSNEGFHESSNVLPTKKSKFIVDSEDEENDQSDVLTTKKSKFIVDFEDGENDQSDVLPTKKSKFIVDSKDEENDQSDVHPTKKSKFIVDSEDEENDQSDVLPTKKSKFIGDFEDEKNGQSDVFPTKESKFIVDSEDEENDQSDGELDPDGEQNIGYDTVCAICDNGGEILPCEGRCLRSFHATKEAGIDAVCESLGYTSAQVKAFPNFYCQNCKYKLHQCFACGKLGSSDVSSKAEVFPCVTANCGHYYHPECVARLLSPSIDTEQEEMRKKVAMGKAFVCPLHICSLCKKGENKNFHDLQFAICRRCPKAYHRKCLPREISFVFDNDKSIEQRAWDGLLDHQILIYCLDHVIVRELGTPARDHLVFPDVKVRKKVLNYKLLGNGKNTLNLGQSFEDLHPKKTLVPNLVTKRSVSIQDGDSAKDMEKICLKKDKCFSSGSVKFDRDRKYLKVKNLSVLNSSLQRPAKKLPLKIANLSCNSRLREDKSLQKKMVDGSIGKTGIEKPLKKIQTSLDANNAEMENSILSLMKDTMSTFNEEEFKKNHQAFSTTSGFTEPVSHHKNLTQGKVEGSVKAIQTALQRLEEGGSIEEAKAICDPGVLHQLFIWQKQLKVYLSPFLHGMRYTSFGRHFTKIDKLKEVANRLHWYVQNGDTVLDFCCGSNDFSRLMKSKLEEMGKSCSFKNYDLFQPKNDFNFEKRDWMSVNAEELPNGSQLIIGLNPPFGVKGSLANKFINKALTFKPKLLILIVPKVTKRLDRKKEGYDLIWEDDEMLSGKSFYLPGSVDTRDKQLEDWNLKPPPLYLWSRPDWTTKHREIAQKHCHIKEEYDVHVNGKEVKNYLMEENHECYQNCRGLHVPGNVLSIFDGIPNDNGANAPEEGATSNASVW* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0891 1064 CDD PHD3_NSD 465 497 - -
Gso3g0891 1064 SMART PHD_3 465 531 IPR001965 -
Gso3g0891 1064 SMART PHD_3 338 393 IPR001965 -
Gso3g0891 1064 SMART PHD_3 398 464 IPR001965 -
Gso3g0891 1064 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 1 1041 - -
Gso3g0891 1064 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 396 486 IPR013083 -
Gso3g0891 1064 MobiDBLite consensus disorder prediction 246 314 - -
Gso3g0891 1064 MobiDBLite consensus disorder prediction 246 331 - -
Gso3g0891 1064 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 335 395 IPR013083 -
Gso3g0891 1064 CDD PHD2_NSD 398 463 - -
Gso3g0891 1064 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 800 908 IPR029063 -
Gso3g0891 1064 PANTHER EDM2-LIKE PROTEIN1 1 1041 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0891 Gso-Chr3 31992148 32009867 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0891 - - gmx:100810533 2155.56