Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0885 ATGGAGAAAACAAGGTACATAGCAGTTATTCCTGGTGTAGGATTCAGCCATTTAGCCCCCATTCTTCAGTTCTCAAAGCAACTTGTTGAGCTGCATCCACATTTTCATGTCACATGCATCGTTCCCTCACTTGGTTCTCTCCCAAGTGCCTCAAAAGCCATCCTAGAAACTCTTCCACCAAATTACATCAACACCATTTTGCTTCCACCGGTGAACCCTAATGACCAATTATCACAAGAAGACATTCCCGTACTAGTCAAAATTCATCTCACAATGAGTCACTCCATGCCATCTATACACAAAGCCTTGAAGTCCTTAACTTCTAAGGCTACCCTTGTGGCCATGGTAGTTGATTCTTTCGCCTTTGAAGCACTAGACTTTGCTCAAGAGTTCAACATGTTGTCCTATGTTTATTTTCCAGCAGCAGCTACAACACTGTCAACACTCTTGCATTTGCCCAAGTTGGACGAGGAAATATCCTGTGAGTATAGAGATTTCTCAGATCCTATCAAAGTACCAGGTTGTGTACCATTTCGTGGTGGAGATTTCTATGGTCCAGCTCAAGATAGAACTAGTCCAGTTTACAAATTCTTGCTTCAACGTGTTAACCGAATCCGTCATGTTGATGGGATCTTCATTAATAGCTTCTTGGAAATGGAAACAAGTCCTATAAGAGCATTGAAAGATGAGGATAAAGGGTACCCTCCTGTGTACCCTGTTGGACCAATTGTCCAAAGTGGTGATGATGATGCAAAAGGGTTGGACTTGGAGTGTTTAACATGGTTGGACAAACAACAAGTTGGTTCAGTTTTGTATGTTTCTTTTGGGAGTGGTGGAACACTTTCGCAAGAGCAAATAACTGAGCTTGCTTTTGGTTTGGAATTGAGTAATCACAAGTTCTTATGGGTTTTGAGAGCACCGAATAATGCAACATCTGATGCTGCTTATCTTGGTGCACAAAATGATGTTGACCCTTTGAAATTCTTGCCTAGTGGGTTTTTGGAGAGAACCAAAGAGAAAGGTATGGTTGTTCCTTCATGGGCACCCCAAATTCAAGTCCTTAGTCACAGTTCGGTTGGTGGATTCTTGACCCACTGTGGTTGGAATTCAATCCTTGAGAGTGTGCTAAAGGGTGTGCCGTTCATCACATGGCCACTATTTGCGGAGCAGAAAATGAATGCGGTTTTGCTAAGTGAGGGTCTCAAAGTGGGAGTGAGGCCAAGAGTTAGTGAAAATGGCTTGGTGGAAAGGGTGGAAATTGTTGACGTGATAAAGTGTCTAATGGAAGGGGAAGAAGGTGCGAAAATGCGTGAAAGAATGAATGAATTAAAAGAAGATGCTACTAATGCACTCAAAGAAGATGGATCTTCTACAAAGGCCCTTTCTCAGTTGCCATTATATTGGAAAATTTTGGCATGA 1419 0.4221 MEKTRYIAVIPGVGFSHLAPILQFSKQLVELHPHFHVTCIVPSLGSLPSASKAILETLPPNYINTILLPPVNPNDQLSQEDIPVLVKIHLTMSHSMPSIHKALKSLTSKATLVAMVVDSFAFEALDFAQEFNMLSYVYFPAAATTLSTLLHLPKLDEEISCEYRDFSDPIKVPGCVPFRGGDFYGPAQDRTSPVYKFLLQRVNRIRHVDGIFINSFLEMETSPIRALKDEDKGYPPVYPVGPIVQSGDDDAKGLDLECLTWLDKQQVGSVLYVSFGSGGTLSQEQITELAFGLELSNHKFLWVLRAPNNATSDAAYLGAQNDVDPLKFLPSGFLERTKEKGMVVPSWAPQIQVLSHSSVGGFLTHCGWNSILESVLKGVPFITWPLFAEQKMNAVLLSEGLKVGVRPRVSENGLVERVEIVDVIKCLMEGEEGAKMRERMNELKEDATNALKEDGSSTKALSQLPLYWKILA* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0885 472 Coils Coil 433 453 - -
Gso3g0885 472 CDD GT1_Gtf-like 7 445 IPR002213 GO:0008194
Gso3g0885 472 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 471 - -
Gso3g0885 472 Gene3D Glycogen Phosphorylase B; 250 452 - -
Gso3g0885 472 PANTHER GLYCOSYLTRANSFERASE 1 471 - -
Gso3g0885 472 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 255 397 IPR002213 GO:0008194
Gso3g0885 472 Gene3D Glycogen Phosphorylase B; 7 457 - -
Gso3g0885 472 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0885 Gso-Chr3 31852436 31854351 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0885 3 469 Glycosyltransferase AT1G01420 47.335 4.43e-154 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0885 K08237 - gmx:100779176 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0885 3 31852436 31854351 Gso8g2801 8 45753837 45755524 PCT