Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0881 ATGGGAGTCTCAGACAACAATGAAGTTTTAGTGACAACAAAGGTAGTTGTTGACTATGATAGAGCAAGTGAGCTCAAAGCTTTTGATGACACACAAGATGGTGTTATGGGACTTACTGATGCTGGTGTCACAAAGATCCCTCTTATATTCCATAACCCCAAAAATTCTCATCATGATGAATCTGATGATGGTTCAGGTAGCACACAACTCAGTGTTCCTTCAATAGATCTTGTTGGTGTTGCTGAAGATCCAGCTACAAGGAAAGTGGTGGTTGAGAAAATCAGACAAGCATGTGAGACATGGGGTTTCTTCCAAGTTGTTAATCATGGAATACCATTGAGTGTTTTGGAGGAGATGAAGAGTGGAGTGAATAGGTTCTATGAGCAAGACTCTGAGGTGAAAAGGGAACTATACACACGTGACCCTTTGAGGCCTTTGGTGTATAATAGCAACTTTGATCTTTTTACTTCACCAGCTGCTAATTGGAGGGATACCTTTTACTGCTTCATGGCTCCTCATCCACCAAAACCCGAAGACTTGCCATCAGTGTGCAGAGACATACTGCTGGAATATGCAAAAGAAGTTAAGAAGCTGGGGAGTGTGTTGTTTGAGTTATTATCAGAAGCCCTTGAGCTGAATCCAAACTATTTGAATGACATTGGTTGCAATGAGGGACTTACACTTGTTTGCCATTGCTACCCTGCATGTCCAGAACCAGAATTGACTTTAGGTGCAACCAAGCACACTGATAATGACTTCATCACTGTGCTTCTGCAAGATCATATTGGTGGCCTCCAAGTTCTTCATGAAAACAGGTGGGTGGATGTGTCCCCTGTACCAGGTGCTCTAGTGATCAACATTGGTGATCTTCTTCAGCTTATAACAAATGACAAATTCAAGAGTGTTGAGCACAGAGTGGTGGCAAACCGTGTAGGTCCAAGAGTATCAGTTGCAAGCTTTGTTAGCACAAGTCTTCAGCCATCAACAAAGCTTTATGGCCCCATAAAGGATTTAGTATCAGAAGATAATCCTCCGAAGTACAGGGAAACTACAGTGCAAGGCTATGTTTCCTATTCCCTGGGAAGAGGCCTTGATGGGACTTCTCCTCTGCCACACTTCAGGATTAAAGATTTCTGA 1137 0.4274 MGVSDNNEVLVTTKVVVDYDRASELKAFDDTQDGVMGLTDAGVTKIPLIFHNPKNSHHDESDDGSGSTQLSVPSIDLVGVAEDPATRKVVVEKIRQACETWGFFQVVNHGIPLSVLEEMKSGVNRFYEQDSEVKRELYTRDPLRPLVYNSNFDLFTSPAANWRDTFYCFMAPHPPKPEDLPSVCRDILLEYAKEVKKLGSVLFELLSEALELNPNYLNDIGCNEGLTLVCHCYPACPEPELTLGATKHTDNDFITVLLQDHIGGLQVLHENRWVDVSPVPGALVINIGDLLQLITNDKFKSVEHRVVANRVGPRVSVASFVSTSLQPSTKLYGPIKDLVSEDNPPKYRETTVQGYVSYSLGRGLDGTSPLPHFRIKDF* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0881 378 Gene3D - 26 358 IPR027443 -
Gso3g0881 378 Pfam 2OG-Fe(II) oxygenase superfamily 226 322 IPR044861 -
Gso3g0881 378 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 222 323 IPR005123 -
Gso3g0881 378 SUPERFAMILY Clavaminate synthase-like 34 365 - -
Gso3g0881 378 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE-LIKE PROTEIN 9 377 - -
Gso3g0881 378 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 9 377 - -
Gso3g0881 378 MobiDBLite consensus disorder prediction 50 69 - -
Gso3g0881 378 Pfam non-haem dioxygenase in morphine synthesis N-terminal 72 173 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0881 Gso-Chr3 31773305 31776505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0881 13 375 Glycosyltransferase AT5G59530 55.738 2.27e-150 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0881 - - gmx:100777564 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1023 7 13771963 13774624 Gso3g0881 3 31773305 31776505 GST