Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0844 ATGACCCAAGTGAAGAACAATCAAGTGGTTCTAAGGAACTATGTCACTGGTTTTCCCAAAGAATCCGACATGAACATTGTTGAAAGTGTCATAACATTGAAGCTTCCACAAGGTTCCAATGATGTGCTTCTCAAAAATCTCTACCTCTCTTGTGACCCTTACATGCGAGCTCTCATGTCCAATATGGAAGACCTCGAGGGATTTCAGACCTATACACCTGGCTCTCCATTAACAGGATATGGGGTTTCTAAAGTCCTTGAATCTGAACACCAAGATTATAAGAAAGGTGACTTAGTATGGGGAATCACTAAATGGGAAGAATTCAGCTTCATCCCCTCATCTCTAATACATTTCAAAATTGAGCACACTGATGTCCCACTTTCATATTATACTGGTATTCTTGTTTCTTTGAACACAGGTATGCCAGGAATGACTGCTTATGCTGGTTTCTTTGAATTAGGCTCTCCCAAGAAAGGAGAGAATGTTTTTGTTTCAGCTGCCTCTGGTGCAGTTGGTCAACTTGTTGGTCAATTTGCTAAATTGGCTGGTTGTTATGTGGTTGGAAGTGCTGGAAGCAAAGAGAAGGTGGATCTTTTAAAGAATAAATTAGGATTTGATGAAGCTTTTAACTACAAAGAAGAGTCAGATCTCAATACAACTTTGAAAAGTTACTTTCCAGAAGGCATTGACATTTACTTTGAGAATGTTGGGGGCAAGACACTAGATGCAGTACTCACAAATATGAGAGTCCATGGTCGCATACCCGTCTGCGGAATGATCTCACAATATAATCTTACTCAACCTGAAGGTGTAACAAATTTGGCAAATCTTATACTTAAGCAAGTTTGTATGGAAGGTTTTATGGTTACTGCATTTTATCACTTATATCCGAAATTCTTGGAGTTTATCCTGCCACATATTAGAGAAGGGAAGGTTGTGTATGTGGAAGACATTGCTGAGGGTCTTGAGAATGGACCTGCTGCCTTGGTTGGCCTCTATAGTGGTCGCAATTTTGGTAAACAAGTGGTTGTTGTTGCTCATGACTGA 1047 0.3992 MTQVKNNQVVLRNYVTGFPKESDMNIVESVITLKLPQGSNDVLLKNLYLSCDPYMRALMSNMEDLEGFQTYTPGSPLTGYGVSKVLESEHQDYKKGDLVWGITKWEEFSFIPSSLIHFKIEHTDVPLSYYTGILVSLNTGMPGMTAYAGFFELGSPKKGENVFVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKLGFDEAFNYKEESDLNTTLKSYFPEGIDIYFENVGGKTLDAVLTNMRVHGRIPVCGMISQYNLTQPEGVTNLANLILKQVCMEGFMVTAFYHLYPKFLEFILPHIREGKVVYVEDIAEGLENGPAALVGLYSGRNFGKQVVVVAHD* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0844 348 CDD double_bond_reductase_like 4 345 - -
Gso3g0844 348 SUPERFAMILY GroES-like 4 175 IPR011032 -
Gso3g0844 348 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 140 308 IPR036291 -
Gso3g0844 348 SUPERFAMILY GroES-like 293 343 IPR011032 -
Gso3g0844 348 SMART PKS_ER_names_mod 42 343 IPR020843 GO:0016491
Gso3g0844 348 Pfam Zinc-binding dehydrogenase 170 303 IPR013149 -
Gso3g0844 348 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 1 348 - -
Gso3g0844 348 PANTHER PROSTAGLANDIN REDUCTASE 1 348 IPR045010 GO:0016628
Gso3g0844 348 Pfam N-terminal domain of oxidoreductase 8 110 IPR041694 -
Gso3g0844 348 Gene3D - 8 343 - -
Gso3g0844 348 Gene3D - 133 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0844 Gso-Chr3 30543647 30546214 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0844 K19825 - gmx:100812337 689.108