Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0842 ATGGCGGAAGTGAGGAACAAACAAGTGGTTCTGAGGGACTATGTGAGTGGTTTTCCTAAGGAATCCGACATGAACATAGTTGAAGGAACCACAATATTGAAGCTTCCACAAGGTTCCAATGATGTGCTTCTAAAAAATCTCTACCTTTCCTGTGACCCTTACATGAGAATGCTCATGACCAAGGTGGAAGGCCTCGACGTGTTTGGCACCTATACACCTGGCTCTCCATTAACAGGGTATGGAGTGTCCAAAGTCCTAGAATCTGGACACCCAGATTACAAGAAAGGTGATTTAGTGTGGGGATCTACAAAATGGGAAGAATTCAGCTTGGTGTCCCCAACTCAAATACTTTTCAAAATTGAGCACACCGATGTTCCGCTTTCATATTATACTGGTATTCTTGGTATGCCGGGAATGACTGCATATGCAGGTTTCTTTGAAGTAGGCTCTCCCAAGAAAGGAGAGAATGTTTTTGTTTCAGCTGCCTCTGGTGCTGTTGGTCAACTTGTTGGCCAATTTGCTAAATTGACTGATTGTTATGTGGTTGGAAGTGCTGGAAGTAAAGAGAAGGTGGATCTTTTGAAGAATAAATTAGGATTTGATGAAGCCTTTAACTACAAAGAAGAGTCAGACCTCAATGCAACTTTGAAAAGATACTTTCCAGAAGGCATTGACATATACTTTGAGAATGTTGGGGGCAAGACACTTGATGCAGTACTCCCAAATATGAGAGTTCTTGGTCGCATACCTGTTTGTGGAATGGTCTCACAGTACAATCTGACACAACCTGAAGGTGTAACAAATTTGGCAAATCTTATATTTAAGCGGATTCGAATGCAAGGTTTTATTGTTGGTGAATTCTATCACCTATATCCAAAATTCTTGGAGTTTGTCCTGCCTCATATTAGAGAAGGGAAGGTTGTGTATGTGGAAGATATTGCTGAAGGTCTTGAGAATGGTCCTGCAGCCTTGGTTGGCCTCTATAGTGGTCGCAATGTTGGTAAACAAGTGGTTGTTGTTGCTCGTGACTGA 1032 0.4196 MAEVRNKQVVLRDYVSGFPKESDMNIVEGTTILKLPQGSNDVLLKNLYLSCDPYMRMLMTKVEGLDVFGTYTPGSPLTGYGVSKVLESGHPDYKKGDLVWGSTKWEEFSLVSPTQILFKIEHTDVPLSYYTGILGMPGMTAYAGFFEVGSPKKGENVFVSAASGAVGQLVGQFAKLTDCYVVGSAGSKEKVDLLKNKLGFDEAFNYKEESDLNATLKRYFPEGIDIYFENVGGKTLDAVLPNMRVLGRIPVCGMVSQYNLTQPEGVTNLANLIFKRIRMQGFIVGEFYHLYPKFLEFVLPHIREGKVVYVEDIAEGLENGPAALVGLYSGRNVGKQVVVVARD* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0842 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 132 303 IPR036291 -
Gso3g0842 343 Pfam Zinc-binding dehydrogenase 165 298 IPR013149 -
Gso3g0842 343 SMART PKS_ER_names_mod 42 338 IPR020843 GO:0016491
Gso3g0842 343 SUPERFAMILY GroES-like 4 170 IPR011032 -
Gso3g0842 343 CDD double_bond_reductase_like 4 340 - -
Gso3g0842 343 Gene3D - 8 338 - -
Gso3g0842 343 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 1 342 - -
Gso3g0842 343 PANTHER PROSTAGLANDIN REDUCTASE 1 342 IPR045010 GO:0016628
Gso3g0842 343 Gene3D - 133 309 - -
Gso3g0842 343 Pfam N-terminal domain of oxidoreductase 7 115 IPR041694 -
Gso3g0842 343 SUPERFAMILY GroES-like 286 338 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0842 Gso-Chr3 30502366 30505135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0842 K19825 - gmx:100811802 689.108