Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0841 ATGTTTGGTATCCTATCATGGATGGGACGATTCTTCATCAAGTTACAAGGTAAGGAGTGGAGGAAAAGGCAAATAAGAAAGATAACAGATCGAGTTTTTGACCGAGTAAAGAATCCAGCACAAAATAATTTGAGATTTGGAGATCTGTATATTGCTATTTTACTTGTGTACAATGATATCAACAAGTATATTCCCGGCCCCCATTTTGATCCTCCGTCAAAAGACAGAATAAAACAAGTCATCACGTTCTGTGATGACAACGAGGATGGCCAAATTAACCGTGACGAATTTTTTGGTTTCTTCGAGCAAATGGCACCCGAAACATTCAATGTTGTTCGAAGAAAACTTGTTGCCACTTTGGTTGCAACACCAACAGTTGCTGCAGTAACAAAGAAAGCTACTGAACGAGTCCCAGTTGTTGGGAAACTGGTGCAATGGTTACCCAAAGCAGTTTATGCTTTCCTTATGACAATTGCAGCTGTGTTGTACCAAGAGGATTCTGCACACTAG 510 0.402 MFGILSWMGRFFIKLQGKEWRKRQIRKITDRVFDRVKNPAQNNLRFGDLYIAILLVYNDINKYIPGPHFDPPSKDRIKQVITFCDDNEDGQINRDEFFGFFEQMAPETFNVVRRKLVATLVATPTVAAVTKKATERVPVVGKLVQWLPKAVYAFLMTIAAVLYQEDSAH* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0841 169 PANTHER CALCIUM-BINDING EF HAND PROTEIN 11 168 - -
Gso3g0841 169 ProSitePatterns EF-hand calcium-binding domain. 85 97 IPR018247 -
Gso3g0841 169 PANTHER S100 CALCIUM-BINDING PROTEIN 11 168 - -
Gso3g0841 169 SUPERFAMILY EF-hand 7 104 IPR011992 -
Gso3g0841 169 ProSiteProfiles EF-hand calcium-binding domain profile. 72 107 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0841 Gso-Chr3 30452227 30455014 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0841 8 168 EF-hand Containing Proteins AT1G64850 56.790 2.90e-64 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0841 - - gmx:100782930 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1051 7 14650457 14655248 Gso3g0841 3 30452227 30455014 GST