Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0840 ATGGGACAAGTCTTTGACAAGTTAGAGGGTAAGGAGTGGAGGCAAAGGCAAATAAGGAAGATAACAGATCGAGTTTTTGACAAAGTAAAGAATCAAATAGAAACTGATAACTTGAGTTTTGAAGATCTCTATATTGCTGTTTTACTTGTGTACAATGATATCAACAAGTATATACCTGGTCCCCATTTTGACCCTCCATCAAAAGACAAAGTCAGAGAAGTCAAACAGAGCTGTGATATCAACCTCGATGGTGATATTGACCGTGATGAATTTTATGATTTCATCCTGATAATGACAGCTGATACATTCACTATTGTTAGCCAAAAACTTATTCTCACATTGGTTGTAGCACCAACAGTTGCAGTGGCAACAAAGAAAGCTACTGAAGGTGTTCCAGGTGTTGGGAGACTGGTGCAAAAGATACCGAATTCAGTTTATGCTTCCCTCGTGACAATTGCAGCTGTGTGGTTCCAAAAAAAGGCTCAGAGTTCTCCACTGTAG 501 0.3932 MGQVFDKLEGKEWRQRQIRKITDRVFDKVKNQIETDNLSFEDLYIAVLLVYNDINKYIPGPHFDPPSKDKVREVKQSCDINLDGDIDRDEFYDFILIMTADTFTIVSQKLILTLVVAPTVAVATKKATEGVPGVGRLVQKIPNSVYASLVTIAAVWFQKKAQSSPL* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0840 166 PANTHER S100 CALCIUM-BINDING PROTEIN 4 163 - -
Gso3g0840 166 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Gso3g0840 166 PANTHER CALCIUM-BINDING EF HAND PROTEIN 4 163 - -
Gso3g0840 166 SUPERFAMILY EF-hand 24 98 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0840 Gso-Chr3 30445725 30448352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0840 1 156 EF-hand Containing Proteins AT1G64850 67.949 3.15e-80 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0840 - - gmx:100526914 308.916