Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0837 ATGAGTTCGCAGCAAATGCAAATGCAAATTCAAATCCAAAACAGTGGTGGTGGCAGTGGCAACAACAACAGCAGCAACATCCCAGTGAGCGAGGTTTTCTGGACTCTCGTCGACAAAGCCGACAAAAAATTCTCCAAAATCAGAGACCTTCCCTTTTACCAACGCAGCAGGCATGATACTTACTTTTATAAGGTGTTCAAGGTCTACACACAATTATGGAAGTTTCAGCAGGAGAATCGGCAGAAGCTGATTGAAGCTGGGCTTAAGAGATGGGAGATTGGTGAGATTGCATCTCGCATTGGGCAACTGTATTTTGGGCAGTACATGCGCACAAGTGATGCAAATTATCTCTCAGAGTCATATATATTCTATGAGGCCATATTGACTCGGGAGTATTTTAAGGAGGGGTTGTTTCAAGATGTGAATATTGCAAACAAACAATTGAGGTTCCTAGCTAGATTCATAATGGTGTGTTTGGTGTTGAACCGAAGGGAAATGGTGCAGCAATTGGTTAATCAGCTTAAAGTATTAGTTGATGAATGCAAGAGAACATTCCAGGAAAGTGACTTTAAAGAATGGAAGCTGGTGGTTCAGGAAATTCTCAGATTTTTAAAAGCTGAAACTGCTTTTATGAATATCAGGCCCTTGAGATACAGTCTAGTTTTGGACTCTCATCCTGATACTTTACCCCATGTGGCTGCAGCCATCACAAAGCGACATTTGAAACTACGAGATGCTGTATTAAGTAGCTTCCATCCAAATGAGGTAAAGTATTCAGAGCTCACCATTGACACTTTTAGGATGCTTCAATGTCTGGAGTGGGAACCTAGTGGTTTGTTTTACCAGTCTAGTGGTTCAAAACTTAGTCAAAATGGGGCTACTGGAACTAGTCGTATCAGTTATATCCAAGATATTGCTGATCCTACCTTACCAGCAAACCCACGAAAAGCTGTGTTATACCGTCCTTCGCTGACCCATTTTATAGCTGTTCTTGCCACAATATGTGAGGAGCTTCCTTCTGATGGTATTCTCCTTGTGTATTTGTCAGCTTCAGGATATTGTGGTTCTGCACAGAATGAATCTGGCTGCATACACTTTGGTCCACGTGGAGATAGAGGATCAAACTGCATATATCCATCTGACTTTGTACCGTTTACTAGAAGACCACTTCTTTTAGTCATTGATAACGACAATAGCAAAGCTTTTAAGGTCATAGCAGAAGCAGAAAAGGGAGAGTCAGTTGCTATGCTCCTTTCTCCAAGCTGTTCGCCTGCTTTGTCTGATTGCTCACATAATTCAAATGGGAGCCTATTCACCATGTTTCTTACAGCTCCACTGCAAGCTTTCTGTATGCTGTTAGGACTTTCAGGCACTGATATTGATTTGGACACATTCAACAAAGCTGAAATGCTGCTCTCATCTTCATTAAATAACTGGGGACTAGCATTGGCAACATCAGACACACTTAATCCTGTTTGGGGACAGATTTTAGGTGATCCCTTCATAAGGAGGCTTCTTTTGAGATTCATATTTTGCCAGGCAGTGTTGACCCTATATGCACCAGTTTACAATGACAACAAATTCCTTCCAACATGTGTCCCTTCTCTTCCGACACCTGTCCTGCCCCCAAGTTACTCATATCAGAGTGTAATTCTGAATCTAGCCAGCATGTTTGGTGCAACTAAGAGATTCATCTTCTCAGAGGATGTTCTTCCTGAAAGTATGCAAACCAACATGAATCAATTAACTCTTTGA 1755 0.4165 MSSQQMQMQIQIQNSGGGSGNNNSSNIPVSEVFWTLVDKADKKFSKIRDLPFYQRSRHDTYFYKVFKVYTQLWKFQQENRQKLIEAGLKRWEIGEIASRIGQLYFGQYMRTSDANYLSESYIFYEAILTREYFKEGLFQDVNIANKQLRFLARFIMVCLVLNRREMVQQLVNQLKVLVDECKRTFQESDFKEWKLVVQEILRFLKAETAFMNIRPLRYSLVLDSHPDTLPHVAAAITKRHLKLRDAVLSSFHPNEVKYSELTIDTFRMLQCLEWEPSGLFYQSSGSKLSQNGATGTSRISYIQDIADPTLPANPRKAVLYRPSLTHFIAVLATICEELPSDGILLVYLSASGYCGSAQNESGCIHFGPRGDRGSNCIYPSDFVPFTRRPLLLVIDNDNSKAFKVIAEAEKGESVAMLLSPSCSPALSDCSHNSNGSLFTMFLTAPLQAFCMLLGLSGTDIDLDTFNKAEMLLSSSLNNWGLALATSDTLNPVWGQILGDPFIRRLLLRFIFCQAVLTLYAPVYNDNKFLPTCVPSLPTPVLPPSYSYQSVILNLASMFGATKRFIFSEDVLPESMQTNMNQLTL* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0837 584 Pfam Protein SCAI 360 520 IPR022709 GO:0003714|GO:0006351
Gso3g0837 584 Pfam Protein SCAI 36 360 IPR022709 GO:0003714|GO:0006351
Gso3g0837 584 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 13 356 - -
Gso3g0837 584 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 357 577 - -
Gso3g0837 584 PANTHER PROTEIN SCAI 357 577 - -
Gso3g0837 584 PANTHER PROTEIN SCAI 13 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0837 Gso-Chr3 30382846 30394482 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0837 - - gmx:100810202 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1054 7 14694691 14710673 Gso3g0837 3 30382846 30394482 GST