Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0829 ATGGCAACAACATTAATCCCCTCAGATCTCACTGAATTTGTGATGCTTCAAGGGAATGGAGTAAAGGGCCTCTCTGAAATGGGCCTAAAGAGCCTCCCAAGTCAATACATCCAACCTTTGGAAGAGATAATGATCAATGTTTTGCCACAAGAGTCCATTCCCATCATTGACATGTCCAATTGGGATGACCCGAAAGTGCAAGATTCAATTTGTGATGCAGCTGAGAAGTGGGGCTTCTTCCAAATCATCAATCATGGGGTGCCCCCTCAAGTGTTGGACAATGTCAAGGATGCAACTTATAGGTTTTATGGGTTGCCACCTGAGGAGAAGGTTAAGTACACAAAAGAGAATTCTTCAACAAAGCATGTGAGGTATGGGTCTAGCTTTAGCCCTGAAGCAGAGAAAGCCCTAGAGTGGAAGGATTATCTCAGCCTCTTCTATGTTTCTGAGGATGAGGCTGCAACAACATGGCCCCCTGCATGCAGGGATGAAGCACTGGAATACATGAAGAGGTCTGAAATCTTTATCAAACGACTTTTAAATGTGCTAATGAAGAGGCTAAATGTAAGTGAAATTGATGAGACAAATGAATCAATATTTATGGGTTCAAAAAGGATCAATCTCAATTATTATCCTGTTTGCCCTAATCATGACCTAACGGTAGCAATAGGGCGACACTCTGATGTCTCAACTCTAACCGTTCTCCTCCAAGATGAAACCGGTGGCCTCTACGTCCGAGCACCGAACCACCACGACTGGATTCATGTGCCACCCGTCTTCGGTGCTATAGTGATCAATATAGGTGATGCACTCCAAATACTGAGCAATGGGCGATACAAGAGTATTGAGCATCGTGTGTCTGCCAACGGAAGCAAGAGTAGGGTTTCAATGCCTATTTTTGTAAACCCTAGACCCTCAGATGTTATTGGCCCTTTGCCTCAAGTGCTTGCTAGTGGTGAGAAGGCCATGTATAAAAATGTGTTGTATTCGGATTATGTGAAGCATTTCTTCAGGAAAGCTCATGATGGAAAGTTGACAATTGACTATGCCAAGATATGCTGA 1062 0.4369 MATTLIPSDLTEFVMLQGNGVKGLSEMGLKSLPSQYIQPLEEIMINVLPQESIPIIDMSNWDDPKVQDSICDAAEKWGFFQIINHGVPPQVLDNVKDATYRFYGLPPEEKVKYTKENSSTKHVRYGSSFSPEAEKALEWKDYLSLFYVSEDEAATTWPPACRDEALEYMKRSEIFIKRLLNVLMKRLNVSEIDETNESIFMGSKRINLNYYPVCPNHDLTVAIGRHSDVSTLTVLLQDETGGLYVRAPNHHDWIHVPPVFGAIVINIGDALQILSNGRYKSIEHRVSANGSKSRVSMPIFVNPRPSDVIGPLPQVLASGEKAMYKNVLYSDYVKHFFRKAHDGKLTIDYAKIC* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0829 353 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 195 303 IPR005123 -
Gso3g0829 353 Gene3D - 10 335 IPR027443 -
Gso3g0829 353 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 151 IPR026992 -
Gso3g0829 353 PANTHER FERULOYL COA ORTHO-HYDROXYLASE 1-LIKE 8 344 - -
Gso3g0829 353 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 8 344 - -
Gso3g0829 353 Pfam 2OG-Fe(II) oxygenase superfamily 208 303 IPR044861 -
Gso3g0829 353 SUPERFAMILY Clavaminate synthase-like 20 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0829 Gso-Chr3 30221996 30224707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0829 20 343 Glycosyltransferase AT5G59530 34.024 1.07e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0829 K06892 - gmx:100777556 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1059 7 14819623 14822265 Gso3g0829 3 30221996 30224707 GST