Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0828 ATGGAAGACTCGGATTCAGTTGCTACACTGATAGATTCTACTACTTCTAAGATACAACAGCTGCAGAAGGCATTTGCTGAACTTGAAAGTTATCGGGCTGTTACTCTTAACTTGAAATGGAAAGAACTAGAGGAACATTTCCATGGTCTTGAGAAATCCTTGAAGAGGCGCTTTGATGAATTGGAAGACCAAGAGAAAGAGTTTGAAAACAAAACGAGGAAGGCTCGTGAGATACTGGAGAAGCGGGAAGCAGCTGTTTTTGCTAAGGAGCAAGATTCGTTGCAGAGGCTTCAAGAGAAAAGAGATGCTGCTTCATTTGCCATTGTAAATGCTCGAGAAAAGCAGAGGAAGATTTCATCACGTGAATTGGCTACTTTCTCTAATGGTGGTAAAGGAGGGATGCCAGGAGTGGAGGAGAAACCAGTGGATACTTTGTCCACTGCAGCTGAAGGTAATGTGGAAGATGTAAAACTTCCTGATAATGGAAATGTGGAGTTGGTATCTTATCCAGAGTTGGTAAAACTATGCAAAGAGATGGATGCTGCTGGACTTCACAAATTCATATCTGATAACCGTAAGAACCTTGCTGCTGTAAGGGATGAAATACCAAATGCTTTAAGAGCTGCTCCTAATGCTGCCTGTTTAGTTTTAGATTCTCTGGAAGGATTTTACTGTACAGAAGTGTCAAATCAGGACGTAAAGAAGGATGCTAACTTATTGGGTCTTCGCCGAACCTGTATCATGCTGATGGAATGTCTCTGTGATTTCCTGAGCAGCTCAGGTTTTGTTTCTAATGTGATTTCAGAAGATATCAAGGACAGGGCAAAAGCAGTTGCTGAAGAATGGAAACCCAGGCTGGATGCTCTTGACATGGATGCTAGCAATGGGAATTCCTTGGAGGCTCATGCATTTTTACAACTTCTTGCTAGTTTTGGAATTGCCTCTGGTTTTGATGAGGAGGAGTTATCTAGATTGATTCCAATGGTGTCTCGGCGCCGCCAAACTGCTGATTTATGTCGTTTTCTTGGGCTGTCAGAAAAGATGCCTGGTGTAATTGAGGTTTTGGTGAACAGTGGGCGACAAATTGATGCTGTTAACTTGGCTTTTGCATTTGATCTTACTGAACAGTTTTGTCCTGTTTCTTTACTGAAGTCTTACTTGAAAGATGCTAGAAAAGCTTCTTCTCCTGTTAGAAGTGCTCACTCTTCTCCCACTGCACAGATTGAGGTGAATGAACGAGAGCTGGTTGCACTTAAGGCTGTAATCAAGTGCATTGAAGAACATAAACTTGATGAGCAGTATCCTCTGGATCCTCTCCAGAAACGATTGGTGCAGCTAGAGAAGGCCAAAGCAGACAAGAAGAGGGAAACTGAAGCAACAAAGCCTCAACCCAAGAGACCTCGTGCAAATGGTGTGGGATACGGTCCACGTGTCACTAACATTCTTTCGGATAAAACTTGCTATGCTAGAGTTGCTGACAGGTATCCACAATACGTGTATGACCGACCACCTTACATGTACCCTGCACCCACTGAGAATCATTGCCCCCCTCTCATGACCACTGCAACATATAACATCTCTCCCAGCCATGGCAACTACTTTGGAAATGGGTATCAGTACCAAGCCTCATATCTCCACTAG 1641 0.4339 MEDSDSVATLIDSTTSKIQQLQKAFAELESYRAVTLNLKWKELEEHFHGLEKSLKRRFDELEDQEKEFENKTRKAREILEKREAAVFAKEQDSLQRLQEKRDAASFAIVNAREKQRKISSRELATFSNGGKGGMPGVEEKPVDTLSTAAEGNVEDVKLPDNGNVELVSYPELVKLCKEMDAAGLHKFISDNRKNLAAVRDEIPNALRAAPNAACLVLDSLEGFYCTEVSNQDVKKDANLLGLRRTCIMLMECLCDFLSSSGFVSNVISEDIKDRAKAVAEEWKPRLDALDMDASNGNSLEAHAFLQLLASFGIASGFDEEELSRLIPMVSRRRQTADLCRFLGLSEKMPGVIEVLVNSGRQIDAVNLAFAFDLTEQFCPVSLLKSYLKDARKASSPVRSAHSSPTAQIEVNERELVALKAVIKCIEEHKLDEQYPLDPLQKRLVQLEKAKADKKRETEATKPQPKRPRANGVGYGPRVTNILSDKTCYARVADRYPQYVYDRPPYMYPAPTENHCPPLMTTATYNISPSHGNYFGNGYQYQASYLH* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0828 546 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 3 546 - -
Gso3g0828 546 Coils Coil 51 81 - -
Gso3g0828 546 PANTHER FRIGIDA-LIKE PROTEIN 3 546 - -
Gso3g0828 546 Coils Coil 436 456 - -
Gso3g0828 546 Pfam Frigida-like protein 168 457 IPR012474 -
Gso3g0828 546 Coils Coil 94 114 - -
Gso3g0828 546 MobiDBLite consensus disorder prediction 450 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0828 Gso-Chr3 30199177 30205303 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0828 - - gmx:100807523 1082.4