Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0812 ATGGCTTCAAATTCCAGCACCAACAACGCTGGCTACCCCATCAAAACCATCGTCGTTTTGGTTCAAGAAAACCGTTCCTTTGACCACATGCTCGGTTGGATGAAGTCCCTCGATCCGAAAATCAACGGTATCACCGGTTCAGAGTCTAACCCGATTTCCACATCCAATCCCAACTCGAATCTGGTTCAATTCTCGGACCAGTCGGTCTATGTTGACCCGGACCCAGGTCACTCGATCCAAGACATTTACGAGCAAATCTTCGGAGAGCCTTGGAGCGAAGCCTCAACGGCAAAGAAATTGCCACCGACCATGCAAGGCTTTGCCCAAAATGCCGGGAGGCAAGCAGTGCCAAAGAATGCGACGGCGACGATGATGGAGACGGTAATGAATGGGTTCAAACCGGATTTAATTCCGGTTTATAAAGAGTTAGTTAAGGAATATGCGGTTTGTGACTGTTGGTTCGCTTCGGTTCCCGCTTCGACCCAACCGAACCGGCTCTATGTGCATTCTGCCACGTCACATGGGTTGACAAGTAATGACACCAATAAGCTTATTGGGGGTTTGCCTCAAAAGACGATATTTGATTCTTTGGATGAAAATGGGTTCAGTTTTGGGATCTATTATCAGTCTCCACCCGCCACCCTTTTCTATAGGAATCTTAGGAAACTGAAATACGTAGATAACTTCCGTCCATTCGATTTGTTCAAAAAGCATTGCAAAGAAGGGAAATTACCAAACTACGTGGTGATTGAGCAAAGATTTTTTGACTTGTTATCAATACCAGGGAACGATGATCACCCATCTCATGATGTTTCGGAGGGTCAAAAGTTTGTGAAAGAAGTGTATGAGGCACTAAGAGGTAGCCCACAATGGAATGAAACATTGTTTGTGATTGTATACGATGAGCATGGAGGGTTTTATGATCACGTGCCAACCCCTGTGGAAGGAGTGCCTAGTCCAGATGATATTGTGGGCCCTGAACCATTCAAGTTTCAGTTTGATAGACTTGGTGTGAGGATTCCAGCCATCATTGTTTCTCCATGGATTGAGCCAGGCACAGTGAAATTGCCTGAACCTGTAAAACTACGAGAAGCTCCTGCTCAAGAAAAGGCCAAGTTGAGTGAATTTCAAGAAGAATTGGTACAAATGGCAGCAACTCTGAATGGGGATCATAGAAAGAGTATATACCCCGACAAGTTAACTGAGAACATGAGTGTTCCGGACGCAGTTAAATATGTTGAAGATGCATTCAATACATTCTTGAATGAGTGTGAGAAGGCAAAGCAAAATGGTGCTGATGAGTCTGAAATTGTCGATTGTGCTGATGGATGTAGTAGTGCACCACCCGATTCCAAAAATTTCTTTTACAATGTGCTGTCTTGTATAACATGTAATCGATAA 1401 0.4433 MASNSSTNNAGYPIKTIVVLVQENRSFDHMLGWMKSLDPKINGITGSESNPISTSNPNSNLVQFSDQSVYVDPDPGHSIQDIYEQIFGEPWSEASTAKKLPPTMQGFAQNAGRQAVPKNATATMMETVMNGFKPDLIPVYKELVKEYAVCDCWFASVPASTQPNRLYVHSATSHGLTSNDTNKLIGGLPQKTIFDSLDENGFSFGIYYQSPPATLFYRNLRKLKYVDNFRPFDLFKKHCKEGKLPNYVVIEQRFFDLLSIPGNDDHPSHDVSEGQKFVKEVYEALRGSPQWNETLFVIVYDEHGGFYDHVPTPVEGVPSPDDIVGPEPFKFQFDRLGVRIPAIIVSPWIEPGTVKLPEPVKLREAPAQEKAKLSEFQEELVQMAATLNGDHRKSIYPDKLTENMSVPDAVKYVEDAFNTFLNECEKAKQNGADESEIVDCADGCSSAPPDSKNFFYNVLSCITCNR* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0812 466 Gene3D Alkaline Phosphatase, subunit A 245 357 IPR017850 -
Gso3g0812 466 Gene3D Alkaline Phosphatase, subunit A 4 190 IPR017850 -
Gso3g0812 466 PANTHER NON-SPECIFIC PHOSPHOLIPASE C3 354 446 - -
Gso3g0812 466 PANTHER NON-SPECIFIC PHOSPHOLIPASE C3 9 354 - -
Gso3g0812 466 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 9 354 IPR007312 GO:0016788
Gso3g0812 466 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 354 446 IPR007312 GO:0016788
Gso3g0812 466 Pfam Phosphoesterase family 14 354 IPR007312 GO:0016788
Gso3g0812 466 SUPERFAMILY Alkaline phosphatase-like 171 354 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0812 Gso-Chr3 29286189 29291130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0812 1 462 Acyl Lipid Metabolism Gene Families AT3G03530 54.328 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0812 K01114 - gmx:100805391 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0652 16 8719026 8723699 Gso3g0812 3 29286189 29291130 GST