Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0782 ATGGCATTCCATGATTTACTCTTCACACCCACCATTTCCCTCTTCATAATTCTATTTTCTCTCTTTTCCACCCCTTCCCATTCTGCCCTCACTTGCGCTTCCCAGAAGCTCAACCGCACCTACGCCAACTGCACCAACCTTCCCACCCTCGGCGCCACCCTCCACTTCACCTTCAACGCCACTAACCGCTCCCTCTCCGTCGCCTTCTCCGCCGAGCCTCCCTCCCGCTCCGGCTGGGTCGCCTGGGGCCTCAACCTCGCCGGCGATGGCATGCGCGGCGCCGAAGCCTTCCTCGCCTTCCCCTCCTCCGCCTCCGCCTCCGCCATCACCCTCGGCCGCTACAACCTCACCTCCTACAAAGCCATCGACGAAGTCAAAGCCTTTACCTTCGACTCGTGGGACCTCGCGGCCGAAGAATCCAACGGCGCCGTAACCATCTACGGCTCCGTCAAGATCCCCGATTCGGCGAGGAACGTCAGCCACGTGTGGCAGGTGGGTCCCGTGGCCGCGGGCAAGCCTGGGGTCCACAGCTTCGAAAAGAAGAATACGGACTCCAAGGCCGCGTTCCCTGTCGCGCTGGTGGGGCCCAACACAACTACACCAGCGAGTGGCGAAAACGCGACTGCGCCCGCGAGTGGTGGGGACAAGAAGAACGGTGCTGCTGGGGAGAGCTTTGGGGTTGGGTTTTACTTTTGGTTGGTTTTCGCATTGATGATTGGTGTCGTTGCTATTTGA 735 0.6041 MAFHDLLFTPTISLFIILFSLFSTPSHSALTCASQKLNRTYANCTNLPTLGATLHFTFNATNRSLSVAFSAEPPSRSGWVAWGLNLAGDGMRGAEAFLAFPSSASASAITLGRYNLTSYKAIDEVKAFTFDSWDLAAEESNGAVTIYGSVKIPDSARNVSHVWQVGPVAAGKPGVHSFEKKNTDSKAAFPVALVGPNTTTPASGENATAPASGGDKKNGAAGESFGVGFYFWLVFALMIGVVAI* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0782 244 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 8 238 - -
Gso3g0782 244 Pfam Protein of unknown function (DUF568) 91 188 IPR045265 -
Gso3g0782 244 CDD DOMON_CIL1_like 41 192 IPR045265 -
Gso3g0782 244 ProSiteProfiles DOMON domain profile. 50 166 IPR005018 -
Gso3g0782 244 PANTHER AUXIN-INDUCED IN ROOT CULTURES PROTEIN 12 8 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0782 Gso-Chr3 28257791 28258965 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0782 - - gmx:100305350 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0678 16 9715868 9717001 Gso3g0782 3 28257791 28258965 GST