Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0749 ATGGGAACAAAGAGGAGCTTCAATTCTCCGGTTAATGTTTTGATTGAAAGGTTGAGGAAGGTTCCAATGAAAGTGAAGATTTTTTGTGGGGTATTGTTTGCTGTTTTTGCTTTGGTGGCCTTAAAGCTCACCATAACAAATCACTACTATTTCTTCATAGCTTCTGAAACGGTCCATGTTGCTGGGATAATTGCCCTCATATACAAGCTTTTTGCCCTGAAGACCTGCACTGGTTTATCGCTTAAGACCCAAGAGCTCACTGCTTTATTCCTAGCAGCAAGATTAAGCTGTAGCACCTTGACAGAGGCCAACATACACACCGCGTTAGATCTGATCTCTCTTTTCGCAACATTATTCCTCATATGGATGATAAGATTCAAGTTAAAGTCATCCTACATCAAGGATCTTGACAACCTGCGTTTATACTTTGTGGTGGTCCCTTCTGCAATCCTTGCGATACTAATCCACCCCTTTACAACTCATTGGCGTTTAGTTCGAATTGTTTGGGCATTCAGTTTGTATTTGGAAGCTGTTTCTGTTCTGCCTCAACTTCGTTTTATGCAGAATGCAAAGATGGTTGAAACATTTACAGGGTATTATGTATTCGCTCTCGGTGTTTCAAGATTCATAGCACTGGCTTACTGGTTAATTCAGATCTATGAGACTCGAGGGGCATATCTATTTTTGGTTGGGAGTGGCTATTTTTGGTTCTTAGCAGCTTTTCTCTCGGAGATGGTTCAATCCTTCATCTTGGCTGACTTTTGTTACTACTACATGAAGAGCTTCATGCAAGGACAAATTTTAAGGAAAATGCCTGTTTAA 822 0.4051 MGTKRSFNSPVNVLIERLRKVPMKVKIFCGVLFAVFALVALKLTITNHYYFFIASETVHVAGIIALIYKLFALKTCTGLSLKTQELTALFLAARLSCSTLTEANIHTALDLISLFATLFLIWMIRFKLKSSYIKDLDNLRLYFVVVPSAILAILIHPFTTHWRLVRIVWAFSLYLEAVSVLPQLRFMQNAKMVETFTGYYVFALGVSRFIALAYWLIQIYETRGAYLFLVGSGYFWFLAAFLSEMVQSFILADFCYYYMKSFMQGQILRKMPV* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0749 273 Pfam ER lumen protein retaining receptor 75 217 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso3g0749 273 PRINTS ER lumen protein retaining receptor signature 51 70 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso3g0749 273 PRINTS ER lumen protein retaining receptor signature 78 98 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso3g0749 273 PRINTS ER lumen protein retaining receptor signature 169 189 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso3g0749 273 PRINTS ER lumen protein retaining receptor signature 191 205 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso3g0749 273 PRINTS ER lumen protein retaining receptor signature 205 223 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso3g0749 273 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 8 272 - -
Gso3g0749 273 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 8 272 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0749 Gso-Chr3 25791206 25798603 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0749 1 273 Miscellaneous Gene Families AT3G25160 58.608 2.45e-114 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0749 - K10949 gmx:100790733 522.702