Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0746 ATGGGATCAAAGATAGGTAATTCCCCATTGAATGTTTTGTTTGAGAGGTTGAGGAAATTGTCAATGAAAGTGAAGATCCTTTTGGGGGTATTGTTTGCTTTATGTGCTTTGGTGGCCTTAAAGTTAATCGTCAAAAGGCACTACTATTTCTTCATAGCCTCTGAAGTAGCCCATGCTGCTGGGACAATTGCCCTCGTATACAAGCTTTTCGCCCTAAAGACCTGCTCTGGTTTATCACTTATAACCCAAGAGCTCACAGCTTTATTCCTAGCAGGAAGAATATGTTGTAGCAACTTCGCAGTGGCTAGCATGCACACCTATCTAGATCTGATATCTCTTTTATCAACATTATTGATCATATGGATGATAAGATTCAAGTTAAAGTCATCCTATATCAAAGAGCTTGATAATATGCGACTATACTTTGTGGTGGTGCCTTCTGCAATCCTTGCCATAATAATCCACCCTTATTCACCTCACTGGAATTTCAGTCGAATTGTTTTCGCATTCAGTTTATATTTAGAAGCTGTTTCTGTTCTCCCTCAACTTCGTTTTCTGCAGAATGCAAAGATGATTGAAACATTTACAGGGTATTATGTATTCGCTCTCGGTGTTTCAAGATTCTTGGCACTGGCTCATTGGATAATTCTGATTTATGAGACTCGAGGGGGATTTCTATTTTTGGCTGGGAGTGGCTATTTCTGGTTCTTGGCAGCTTTTATCGCAGAGATTGTTCAATCGTTCATCTTAGCTGACTTCTGTTACTATTACATAAAGAGCTTCATGCAAGGACAACTTTTGAGGAAAATGCCTGTTTAA 819 0.3919 MGSKIGNSPLNVLFERLRKLSMKVKILLGVLFALCALVALKLIVKRHYYFFIASEVAHAAGTIALVYKLFALKTCSGLSLITQELTALFLAGRICCSNFAVASMHTYLDLISLLSTLLIIWMIRFKLKSSYIKELDNMRLYFVVVPSAILAIIIHPYSPHWNFSRIVFAFSLYLEAVSVLPQLRFLQNAKMIETFTGYYVFALGVSRFLALAHWIILIYETRGGFLFLAGSGYFWFLAAFIAEIVQSFILADFCYYYIKSFMQGQLLRKMPV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0746 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 6 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso3g0746 272 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 6 271 - -
Gso3g0746 272 PRINTS ER lumen protein retaining receptor signature 50 69 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso3g0746 272 PRINTS ER lumen protein retaining receptor signature 77 97 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso3g0746 272 PRINTS ER lumen protein retaining receptor signature 168 188 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso3g0746 272 PRINTS ER lumen protein retaining receptor signature 190 204 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso3g0746 272 PRINTS ER lumen protein retaining receptor signature 204 222 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso3g0746 272 Pfam ER lumen protein retaining receptor 74 216 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0746 Gso-Chr3 25619686 25626782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0746 1 272 Miscellaneous Gene Families AT3G25160 59.559 2.02e-112 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0746 K10949 - gmx:100790210 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0726 16 12298843 12300572 Gso3g0746 3 25619686 25626782 GST