Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0702 ATGTCCGGAGAGCCACGGCCGTTGGAGATCCACCTGAGGGTCAACTCCAAGAGAGGCACCACCATGGTGCACCCCGTGGCGGCGGCGGAGACGGTGGAGGTTCCGATTCAGTACCCCAGAGAGGAAGAAGTGAAGCATTACAGAAAGTGGTTCTCTTGGCTGATACCTCTCTTTGTGGTTGCCAACATTGTTATGTTTGTGATCACTATGTATGTCAATAACTGCCCGCGTAACTCTGTCTCCTGCATTGCCTCCTTCTTGGGTCGCTTCTCCTTCCAGCCCTTCAAAGAAAACCCCCTCTTGGGCCCTTCTTCGTTGACGCTGCAAAAGATGGGGGCTCTTGATGTGAGCAGAGTGGTTCACAGACACCAGGGGTGGCGCCTCATCACTTGTATGTGGCTACATGCTGGGGTTTTCCATCTGTTGGCAAATATGCTGGGTATTCTAGTCATTGGAATTCGGCTTGAGCAAGAATTTGGGTTTGTGCTAATTGGACTGCTATTTGTCATATCTGGATTTGGGGGGAGTTTGCTTTCTGCTCTGTTTATCCAGTCAAACATTTCTGTTGGTGCTTCTGGTGCACTTTTTGGCTTGCTGGGAGGCATGCTTTCAGAACTCATTACTAACTGGTCTATATATGATAACAAGCTAACAGCACTCCTCACCCTTGTGATCATCATTGTTATCAATCTAGCAGTTGGAATTCTCCCACATGTGGACAATTTTGCTCATATTGGAGGCTTTCTTACTGGATTTCTTCTCGGATTTGTGTTTTTGATACGTCCCCAGTTTGGATGGGTTAACCAACGATATGCTCCCCTAAATTATTCTCCAGGACGAGTGAAGCCTAAATTCAAGAAATATCAGTGCATCTTGTGGGTCTTCTCCCTGATCATTCTAGTTGTTGGGCTTTCTGTTGGGCTGGTTGCACTTCTCCAAGGTGTTGATGCAAATGATCACTGCTCCTGGTGCCATTATCTGTCTTGTGTTCCAACTTCAAAATGGAGCTGCCATACAGAGGCAGCATATTGTCAGTCAAACCAACTTGGCAACCAGTTGAACGTAACATGCTCAAGCAATGGTAAATCCAGTACATACTTCATGCAAAATCCAACCAGTTCCCAGATCCAGCAATTGTGTACTCAACTTTGTAGTTGA 1158 0.4663 MSGEPRPLEIHLRVNSKRGTTMVHPVAAAETVEVPIQYPREEEVKHYRKWFSWLIPLFVVANIVMFVITMYVNNCPRNSVSCIASFLGRFSFQPFKENPLLGPSSLTLQKMGALDVSRVVHRHQGWRLITCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVLIGLLFVISGFGGSLLSALFIQSNISVGASGALFGLLGGMLSELITNWSIYDNKLTALLTLVIIIVINLAVGILPHVDNFAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPGRVKPKFKKYQCILWVFSLIILVVGLSVGLVALLQGVDANDHCSWCHYLSCVPTSKWSCHTEAAYCQSNQLGNQLNVTCSSNGKSSTYFMQNPTSSQIQQLCTQLCS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0702 385 SUPERFAMILY Rhomboid-like 50 263 IPR035952 -
Gso3g0702 385 Gene3D - 47 261 IPR035952 -
Gso3g0702 385 PANTHER RHOMBOID-RELATED 17 384 IPR002610 GO:0004252|GO:0006508|GO:0016021
Gso3g0702 385 PANTHER RHOMBOID-LIKE PROTEIN 4 17 384 - -
Gso3g0702 385 Pfam Rhomboid family 120 261 IPR022764 GO:0004252|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0702 Gso-Chr3 21824403 21829998 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0702 - - gmx:100801675 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0702 3 21824403 21829998 Gso3g0702 3 21824403 21829998 ECH