Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0678 ATGAATCCCCCCCAACCGCCGCAGCCCCACCGTCCCTCTTGCCCCCGCCATCCCGACGAAGCCTTCACCGGCTTCTGTCCCTCATGCCTCTGCGAACGCCTCGCCCTCTTAGACCCCAACAACATCACCGCCTCCTCCTCCGCCTCCCGGAAACCCCCCTCCACCGCCGCCGCCGCCCTTAAAGCCCTCTTCCGCCCCCCTCCCCTCCCGGAACTTCGCCGCACCAAATCCTTCTCCGCCTCCAAAAACGAACCCTTCTCCTCCTCCTCCTCCTCCTCCTTCGAACCCCAGCGCAAATCCTGCGACGTCAGAGTCCGCAGCACCCTCTCCAATCTCTTCCACCAAGACATCAACATTAACATTAACCCCCAAAACGACAACGCTCCACGTGTCGTTCAACCTCACCCCCAACAAAACGACAATCCTCCACGTGTCCTCGACCAACCCGAAAATCCAGAAGAGGACGAAGACGATATTAGGGTTCTGGAGGAGCCCAAGCATTGTGTGAACGAAATCGAAGAACTTGAAGAAGAACTTGGAGAAGAAGAGGAGATACTAAAACAGAAAGAAAAAGAAGAAGATCTTGTTGCTATTGTTGAAGAAGAAGACGTGGGGTTGAAGACAATGAAGGACCACATTGACCTTGATTCTTCTCAGAACAACAAGCAGCAGAAAGCGCGTGACTTTAAAGACCTTGCGGGGAGCTTCTTCTCGGCGGCTTCGGTTTTCAGCAAGAAGCTGCAGAAGTGGCGGCAGAAGCAGAAGGCGAAGAAGCGGCGGAGCGGCGGCGCGCTGCCGGTGGAGAAGCCGATCGGGCGGCAATTCCGCGACACGCAGTCGGAGATCGCCGACTACGGGTTCGGGCGGCGGTCGTGCGACACCGATCCGAGATTCTCGCTAGACGCCGGACGGTTCTCGCTCGACGCCGGCCGGATGTCGTTCGACGACCCGCGGTACTCGATCGAGGAGCCGCGGGCGTCGTGGGATGGTTATTTGGTGGGGAGGAACACGTTTCCGAGGATGCCGACGATGTTGTCGGTGGTGGAGGACGGACCGGTTCCTATGCCGGTGCCGGTGAACCATGTAGTGAGGACTGATATGCAGATTCCAGTGGAAGAGGGTTTGAATGAAGATGAGAGTATGCCTGGTGGGAGTGCACAGACAAGGGACTATTACGATTCGGGTTCCAGGAGGAGGAAGAGTCTTGATAGGTCTAGTTCAGCAAGAAAGAGTATTAGTTTGGAGGTGGATGAGTTAGGGAATAATGGGAATGAGAATGGGAACGGGAATGGGAATGCTAAGGTGGCTCCTGCTGGGGTGGATTATGCGCAAGGGGTGAGAATGGGGTTTAACGATCGCGAATTCGACCGGTCGAATTCACTGCGGGAGCATTGCTGTTCTGAAAAGATGTTTGATGTGGGGGTGATTGGGAAGGAAGGGAAGAAGGGGCGGCGGTGGCGGTGGAGCATTTGGGGCTTTATTCACCGGCGTGGTGGGAACAAGGATGAGGATGAGGATAGGTATAGCAGGGTGAATGGGGTGGAGAGGTCGTATTCGGAGTCGTGGGGCGCAGACGGTAGAGGTGGTGGTGGTGGTGGTTTTAATGGGAGGATATTGAGGAGCAATAGTAGTGTGAGTTGGAGGAATGCTCAAGGGGTTGGGAATTGTGGTGGTGGGGGGTTTGGGGGTTTTAGGAGGAATGGTGTTCAGAGTAATGGGAATGGGAAGAAGGGGAAGGATGAGTTTGTTTTGGAAAGGAGTAGGAGTGCAAGGTATTCTCCTAACAACATTGACAATGGCCTCTTGAGGTTTTACTTGACTCCAATGAGGGGGAGCAGAAGAAACGGGTCTGTGAAAAGTAGGTCAAATCAAGCACATTCCATTGCAAGAAGTGTGCTTGGATTGTATTGA 1911 0.5463 MNPPQPPQPHRPSCPRHPDEAFTGFCPSCLCERLALLDPNNITASSSASRKPPSTAAAALKALFRPPPLPELRRTKSFSASKNEPFSSSSSSSFEPQRKSCDVRVRSTLSNLFHQDINININPQNDNAPRVVQPHPQQNDNPPRVLDQPENPEEDEDDIRVLEEPKHCVNEIEELEEELGEEEEILKQKEKEEDLVAIVEEEDVGLKTMKDHIDLDSSQNNKQQKARDFKDLAGSFFSAASVFSKKLQKWRQKQKAKKRRSGGALPVEKPIGRQFRDTQSEIADYGFGRRSCDTDPRFSLDAGRFSLDAGRMSFDDPRYSIEEPRASWDGYLVGRNTFPRMPTMLSVVEDGPVPMPVPVNHVVRTDMQIPVEEGLNEDESMPGGSAQTRDYYDSGSRRRKSLDRSSSARKSISLEVDELGNNGNENGNGNGNAKVAPAGVDYAQGVRMGFNDREFDRSNSLREHCCSEKMFDVGVIGKEGKKGRRWRWSIWGFIHRRGGNKDEDEDRYSRVNGVERSYSESWGADGRGGGGGGFNGRILRSNSSVSWRNAQGVGNCGGGGFGGFRRNGVQSNGNGKKGKDEFVLERSRSARYSPNNIDNGLLRFYLTPMRGSRRNGSVKSRSNQAHSIARSVLGLY* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0678 636 Pfam Protein of unknown function (DUF740) 3 614 IPR008004 -
Gso3g0678 636 MobiDBLite consensus disorder prediction 79 99 - -
Gso3g0678 636 Coils Coil 169 202 - -
Gso3g0678 636 MobiDBLite consensus disorder prediction 417 431 - -
Gso3g0678 636 MobiDBLite consensus disorder prediction 119 157 - -
Gso3g0678 636 MobiDBLite consensus disorder prediction 374 435 - -
Gso3g0678 636 MobiDBLite consensus disorder prediction 119 145 - -
Gso3g0678 636 MobiDBLite consensus disorder prediction 392 406 - -
Gso3g0678 636 PANTHER PROTEIN: UPF0503-LIKE PROTEIN, PUTATIVE (DUF740)-RELATED 1 636 IPR008004 -
Gso3g0678 636 MobiDBLite consensus disorder prediction 61 99 - -
Gso3g0678 636 PANTHER - 1 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0678 Gso-Chr3 20594134 20596454 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0678 - - gmx:100807102 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0678 3 20594134 20596454 Gso3g0678 3 20594134 20596454 ECH
Gso1g0938 1 37779115 37781413 Gso3g0678 3 20594134 20596454 GST
Gso18g1581 18 46886019 46888617 Gso3g0678 3 20594134 20596454 PCT
Gso7g1226 7 17308612 17311161 Gso3g0678 3 20594134 20596454 PCT