Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0670 ATGGCTCGCAAGCCTTTCAAATTCAATGAGGATGTTCTCGAGCAACTTAGAAATGGGACTGCGAAATTCGAGGTTGTTTCTTCCCCGGTTCCTTCAGTTGCTGCTCCTCCTAACCGGAACACGAGCTTGTTTGGGATTGGGAATAGTAGCACTGTCTTATTCGCCAGAATTGGCTCATCCTTTGGTGGACACTCTCCAGCAATGAAGAAACTTGAGCATTTTTCAGTTCAGAAGGTTACAGGGGATGGACGGTGTCTGTTTCGTGCACTGGTCAAAGGAATGGCTTACAATAAGGGAACCACTCTCAATCAACGCGAGGAGAGAGAAAATGCAGATGAATTAAGAATGGCTGTGAAAGAAGCTATATGTGAAAATGAAGGTGAACGTAAATTATACGAAGAAGCCCTCATTGCCATCACAGTTGACGAGCCTATAAAACGTTACTGCCAGCGGATTGTGCGACCTGATTTCTGGGGAGGAGAATCAGAGCTATTGGTACTGTCAAAGTTATGTAAGCAGCCAATCATTGTGTACATACCAGAGCATGAGCATAGAAGTGGTGGTTTTGGATCTGGTTTCATTCCCATTGCAGAGTATGGAAGTGACTTTAGAAAGGGTTCTAGCAGAAAAGCTGTGAGGCTATTATACAGCGGTAAGAACCATTATGATCTTCTAGTATGA 681 0.4405 MARKPFKFNEDVLEQLRNGTAKFEVVSSPVPSVAAPPNRNTSLFGIGNSSTVLFARIGSSFGGHSPAMKKLEHFSVQKVTGDGRCLFRALVKGMAYNKGTTLNQREERENADELRMAVKEAICENEGERKLYEEALIAITVDEPIKRYCQRIVRPDFWGGESELLVLSKLCKQPIIVYIPEHEHRSGGFGSGFIPIAEYGSDFRKGSSRKAVRLLYSGKNHYDLLV* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0670 226 SUPERFAMILY Cysteine proteinases 73 226 IPR038765 -
Gso3g0670 226 Gene3D - 50 226 - -
Gso3g0670 226 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 1 226 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Gso3g0670 226 Coils Coil 104 124 - -
Gso3g0670 226 PANTHER OTU-LIKE CYSTEINE PROTEASE FAMILY PROTEIN, EXPRESSED 1 226 - -
Gso3g0670 226 Pfam OTU-like cysteine protease 80 200 IPR003323 -
Gso3g0670 226 ProSiteProfiles OTU domain profile. 74 226 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0670 Gso-Chr3 20389361 20401653 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0670 - - gmx:100807522 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0670 3 20389361 20401653 Gso3g0670 3 20389361 20401653 ECH
Gso1g0929 1 37483241 37490846 Gso3g0670 3 20389361 20401653 GST