Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0666 ATGGTGGCAGATTCCAAGTCCAATTCCGACCTCTCCTTCGGAAAAATCTTTGCCAGCAGTGCTTTCTCTGCATGTTTCGCTGAGGTGTGTACTATTCCTTTGGATACTGCCAAAGTGAGGCTTCAGCTTCAAAAGCAAGCTGTAGCTGGTGATGTTGTCTCCTTACCTAAATATAAGGGTATGCTGGGAACAGTTGGAACCATTGCCAGGGAAGAAGGTCTTTCAGCACTCTGGAAGGGCATTGTGCCAGGGTTACATCGTCAATGTTTGTATGGAGGCTTAAGAATTGGGTTATATGAACCTGTTAAGACTTTCTATGTGGGGAAAGACCATGTTGGAGATGTTCCATTGTCAAAGAAAATTCTTGCTGCATTTACAACTGGTGCTTTTGCAATTGCAGTGGCAAATCCAACCGATCTTGTCAAAGTTAGACTTCAAGCTGAAGGAAAATTACCTCCTGGTGTTCCCAGGCGCTACTCTGGATCTTTAAATGCTTATTCAACAATTGTGAGACAGGAAGGAGTTGGGGCTCTTTGGACTGGGCTTGGCCCCAATATAGCAAGAAATGGTATCATCAATGCTGCCGAATTAGCCAGCTATGATCAAGTGAAACAGACTATTTTGAAAATTCCAGGATTCACTGACAATGTTGTAACTCATCTTCTTGCTGGTCTTGGGGCAGGGTTTTTCGCCGTCTGTATTGGCTCCCCAGTTGATGTGGTTAAGTCGAGAATGATGGGAGATTCTAGTTACAAGAACACCCTTGATTGTTTTATCAAAACATTGAAGAATGATGGACCCTTAGCCTTTTATAAAGGGTTCCTCCCAAATTTTGGACGGCTGGGATCTTGGAATGTGATCATGTTTCTAACCTTAGAACAGACTAAAAAGTTCGTCAAAAGTTTAGAGTCGTCCTGA 918 0.4314 MVADSKSNSDLSFGKIFASSAFSACFAEVCTIPLDTAKVRLQLQKQAVAGDVVSLPKYKGMLGTVGTIAREEGLSALWKGIVPGLHRQCLYGGLRIGLYEPVKTFYVGKDHVGDVPLSKKILAAFTTGAFAIAVANPTDLVKVRLQAEGKLPPGVPRRYSGSLNAYSTIVRQEGVGALWTGLGPNIARNGIINAAELASYDQVKQTILKIPGFTDNVVTHLLAGLGAGFFAVCIGSPVDVVKSRMMGDSSYKNTLDCFIKTLKNDGPLAFYKGFLPNFGRLGSWNVIMFLTLEQTKKFVKSLESS* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0666 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 115 206 IPR018108 -
Gso3g0666 305 SUPERFAMILY Mitochondrial carrier 10 294 IPR023395 -
Gso3g0666 305 Pfam Mitochondrial carrier protein 114 209 IPR018108 -
Gso3g0666 305 Pfam Mitochondrial carrier protein 216 300 IPR018108 -
Gso3g0666 305 Pfam Mitochondrial carrier protein 10 108 IPR018108 -
Gso3g0666 305 PRINTS Mitochondrial brown fat uncoupling protein signature 18 30 IPR002030 GO:0006839|GO:0031966
Gso3g0666 305 PRINTS Mitochondrial brown fat uncoupling protein signature 46 65 IPR002030 GO:0006839|GO:0031966
Gso3g0666 305 PRINTS Mitochondrial brown fat uncoupling protein signature 99 111 IPR002030 GO:0006839|GO:0031966
Gso3g0666 305 PRINTS Mitochondrial brown fat uncoupling protein signature 169 186 IPR002030 GO:0006839|GO:0031966
Gso3g0666 305 PRINTS Mitochondrial brown fat uncoupling protein signature 212 230 IPR002030 GO:0006839|GO:0031966
Gso3g0666 305 PRINTS Mitochondrial brown fat uncoupling protein signature 287 305 IPR002030 GO:0006839|GO:0031966
Gso3g0666 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 298 IPR018108 -
Gso3g0666 305 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 4 299 - -
Gso3g0666 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 105 IPR018108 -
Gso3g0666 305 Gene3D Mitochondrial carrier domain 13 304 IPR023395 -
Gso3g0666 305 PANTHER MITOCHONDRIAL UNCOUPLING PROTEIN 1 4 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0666 Gso-Chr3 20244723 20249343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0666 1 305 Miscellaneous Gene Families AT3G54110 82.353 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0666 K15103 - gmx:100809667 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0666 3 20244723 20249343 Gso3g0666 3 20244723 20249343 ECH
Gso1g0924 1 37364447 37368918 Gso3g0666 3 20244723 20249343 GST
Gso18g1571 18 46669403 46673970 Gso3g0666 3 20244723 20249343 PCT
Gso7g1217 7 17214450 17219102 Gso3g0666 3 20244723 20249343 PCT