Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0579 ATGGCCAAATCAATCAAATTCTTTGAGTTGAACACAGGGGCCAAGATTCCTTCTCTTGGGTTAGGGACTTGGCAAGCTGAACCTGGTGTTGTAGCTGAAGCTCTCACCACAGCCATTCAGGTTGGATACAGGCATATTGACTGTGCTAGTGCGTATAAGAATCAAGCAGAGATTGGTTCTGCTCTTAAGAAGCTTTTTGATGATGGTGTGGTGAAGCGTGAGGACTTATGGATCACTTCCAAACTCTGGTGTTCAGATCATGCACCAGAAGATGTGCCAAAAGCATTGGATAAAACATTACAGGAATTGCAACTTGACTATCTTGACCTCTATCTGATCCACTGGCCAGTCCGCATGAAAAGTGGAACATTTGGACTCAATAAAGAATATCTTGAGCAACCAGACATTCCCAATACATGGAGAGCAATGGAGGCACTCTATGACTCAGACAAGGCTAGAGCCATAGGAGTGAGCAATTTCTCTTCAAAGAAGCTTCAAGATTTGTTAGATATAGCAAGAGTGGTTCCTGCTGTTAACCAAGTGGAATTGCACCCAGGATGGCAGCAGCCAAAGTTGCGCGCATTTTGTGAATCTAAAGAAATTCATCTATCTGGATATTCTCCACTAGGTTCACCAGCAGCTCTCAAAAGTGATATTCTTAAGAATCCTGTTGTCACAGAGATTGCAGAGAGATTGGGGAAGACACAAGCACAAGTTGCCCTTCGATGGGGCTTGCAAGCAGGTCATAGTGTGCTTCCTAAGAGCACTAATGAGTCCAGAATCAAGGGAAATTTTGATATCTTTGACTGGTCTATTCCTCAAGATTTGATGACCAAGATCTCTGAAATTAAGCAGGAAAGGCTAGTTAAGGCCAGTTTTTTTGTTCACGAGACCTATGGTGCCTATAGGAGCATTGAAGACTTCTGGGATGGTGAACTCTGA 942 0.4342 MAKSIKFFELNTGAKIPSLGLGTWQAEPGVVAEALTTAIQVGYRHIDCASAYKNQAEIGSALKKLFDDGVVKREDLWITSKLWCSDHAPEDVPKALDKTLQELQLDYLDLYLIHWPVRMKSGTFGLNKEYLEQPDIPNTWRAMEALYDSDKARAIGVSNFSSKKLQDLLDIARVVPAVNQVELHPGWQQPKLRAFCESKEIHLSGYSPLGSPAALKSDILKNPVVTEIAERLGKTQAQVALRWGLQAGHSVLPKSTNESRIKGNFDIFDWSIPQDLMTKISEIKQERLVKASFFVHETYGAYRSIEDFWDGEL* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0579 313 SUPERFAMILY NAD(P)-linked oxidoreductase 8 286 IPR036812 -
Gso3g0579 313 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 2 312 - -
Gso3g0579 313 ProSitePatterns Aldo/keto reductase family signature 1. 42 59 IPR018170 GO:0016491
Gso3g0579 313 CDD AKR_AKR4C1-15 6 290 IPR044498 GO:0016491
Gso3g0579 313 ProSitePatterns Aldo/keto reductase family putative active site signature. 252 267 IPR018170 GO:0016491
Gso3g0579 313 PRINTS Aldo-keto reductase signature 38 62 IPR020471 GO:0016491
Gso3g0579 313 PRINTS Aldo-keto reductase signature 98 116 IPR020471 GO:0016491
Gso3g0579 313 PRINTS Aldo-keto reductase signature 143 160 IPR020471 GO:0016491
Gso3g0579 313 PRINTS Aldo-keto reductase signature 177 206 IPR020471 GO:0016491
Gso3g0579 313 PRINTS Aldo-keto reductase signature 219 243 IPR020471 GO:0016491
Gso3g0579 313 Pfam Aldo/keto reductase family 19 283 IPR023210 -
Gso3g0579 313 Gene3D - 4 313 IPR036812 -
Gso3g0579 313 ProSitePatterns Aldo/keto reductase family signature 2. 143 160 IPR018170 GO:0016491
Gso3g0579 313 PANTHER ALDO/KETO REDUCTASE 2 312 - -
Gso3g0579 313 PIRSF AKR 1 307 IPR020471 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0579 Gso-Chr3 15564411 15567508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0579 K00002 - gmx:100792657 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0579 3 15564411 15567508 Gso3g0579 3 15564411 15567508 ECH
Gso1g0852 1 34043268 34046502 Gso3g0579 3 15564411 15567508 GST