Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0555 ATGGAACTCTTGCAAAATGGCCACAAAAATTTGGTCAGCATCAAACCCTCCGAGTTACCCCTCTTGAATGGGGCCGCGTTAACTCTCCTCAACTCGCTCTCCGAAACTCATGAGTACTATGGCAACATAGATCCTTCCAGAGTTTTTGTCACCAAAGTGAAGCGTATCATTGTAAAGGTTGGAACAGCTGTTGTTACTCGAAGTGATGGAAGATTAGCATTGGGCAGAATTGGAGCTCTCTGTGAGCAGCTTAAAGAACTTAGCAGTCAAGGGTATGAAGTCATATTGGTAACTTCAGGTGCTGTTGGTCTTGGCAGGCAAAGGCTTAGATACCGCAAATTGGCCAATAGCAGCTTTTCTGATCTTCAAAAGCCACAAGGAGAGCTTGATGGAAAAGCATGCGCGGCTGTTGGGCAGAGTAGTCTCATGGCTCTCTATGATACCATGTTCAGCCAGCTTGATGTGACTTCTTCCCAACTTCTTGTGAATGATGGGTTTTTCAGAGATTCTGGCTTTAGAAAACAACTTTCAGACACGGTGAACTCATTGTTAGATTTAAGGGTTATCCCCATTTTCAATGAAAATGATGCTGTTAGTACTAGGAAGGCACCATATGAGGATTCTTCGGGTATTTTCTGGGACAATGACAGTTTGGCTGGTCTATTAGCCCTTGAACTTAAAGCTGACCTCCTTGTTTTATTGAGTGATGTTGAGGGTCTTTATAGTGGTCCTCCAAGTGACCCAAACTCAAAGTTGATCCATACATATGTAAAAGAGAAGCATCAAGGGGAAATTACTTTTGGAGACAAGTCAAGATTGGGGAGAGGGGGTATGACTGCTAAAGTTAATGCTGCTGTTTGCGCTGCTCATGCTGGCATCCCGGTCATTATAACTAGTGGCTATGCTACAAACAACATCATACGAGTGCTTCAAGGGGAAAGAATAGGTACTGTATTTCATAAAGATGCTCATTTATGGACCAATATAAAGGAAATGAGCGCACGTGAAATGGCAGTTGCAGCACGTGAGGGTTCTAGACAGCTTCAGATCCTCAAATCTGAAGATAGGAGGAAAATATTGCTGGCAATTGCTGATGCATTGGAGAAAAATGAAAGTATGATAAGGCATGAGAATGAGGCTGATGTTGCTGATGCTGTGGTAGCTGGATATGAAAAATCCTTGATATCACGTTTAACCCTGAAGCAAGAGAAGATCTCTAGTCTTGCAAAGTCTGTGCGCCTGCTGGCAGATATGGAAGAACCAATTGGTCAAATTTTAAAAAGGACCGAGCTAGTAGATAAACTCATCCTGGAGAAGACATCATGTCCTTTGGGTGTCCTTCTGGTTATATTTGAGTCTCGACCTGATGCCCTTGTTCAGATAGCTGCATTGGCAATTCGAAGTGGGAATGGTTTACTGCTTAAAGGTGGAAAGGAAGCCCGACGATCAAATGCAATCTTACACAAGGTCATTACTTCAGTGATGCCAGATACTGTTGGTGACAAACTTATTGGGCTTGTGACTTCAAGAGATGAGATTCCTGACCTACTTAAGCTTGATGATGTAATAGATCTAGTGGTCCCTAGAGGCAGTAATAAGCTTGTTTCTCAAATCAAGGAATCAACAAAAATTCCTGTTCTTGGTCATGCTGATGGAATTTGTCATGTATATGTTGACAAGTCTGCTAATTTTGATATGGCAAAGCAGATTGTTAGGGATGCAAAGACTGATTATCCTGCAGCTTGCAATGCAATGGAAACTCTTCTCATACACAAGGATCTGTCAAATAATGGTGGACTTAATGAGCTTGTCCTTGAACTCCAACGAGAAGGTGTTAAAATGTTTGGTGGACCAAGAGCCAGCGGCTTACTAAACATTGCTGAAACGAACACTTTTCATCATGAGTATAGTTCACTTGCTTGCACAGTTGAAATTGTAGAAGATGTATTTGCTGCCATTGACCACATAAATCAACATGGAAGTGCTCATACTGAATGCATTGTTACAGAAGATAGTGAAGTTGCTGAGACTTTCTTAAGTCAAGTTGACAGTGCTGCTGTATTCCACAATGCAAGTACGCGGTTTTGTGATGGAGCACGCTTTGGGCTTGGTGCAGAGGTTGGAATTAGTACAAGTCGAATTCATGCTCGAGGTCCTGTAGGAGTTGAGGGGCTGTTGACAAACAGATGGATTTTGAGAGGGAGTGGGCATGTGGTTGATGGTGATCAAGGGATCGATTACACTTACAAAGAGCTTCCACTAAAAGCATAG 2271 0.4249 MELLQNGHKNLVSIKPSELPLLNGAALTLLNSLSETHEYYGNIDPSRVFVTKVKRIIVKVGTAVVTRSDGRLALGRIGALCEQLKELSSQGYEVILVTSGAVGLGRQRLRYRKLANSSFSDLQKPQGELDGKACAAVGQSSLMALYDTMFSQLDVTSSQLLVNDGFFRDSGFRKQLSDTVNSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSDPNSKLIHTYVKEKHQGEITFGDKSRLGRGGMTAKVNAAVCAAHAGIPVIITSGYATNNIIRVLQGERIGTVFHKDAHLWTNIKEMSAREMAVAAREGSRQLQILKSEDRRKILLAIADALEKNESMIRHENEADVADAVVAGYEKSLISRLTLKQEKISSLAKSVRLLADMEEPIGQILKRTELVDKLILEKTSCPLGVLLVIFESRPDALVQIAALAIRSGNGLLLKGGKEARRSNAILHKVITSVMPDTVGDKLIGLVTSRDEIPDLLKLDDVIDLVVPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANFDMAKQIVRDAKTDYPAACNAMETLLIHKDLSNNGGLNELVLELQREGVKMFGGPRASGLLNIAETNTFHHEYSSLACTVEIVEDVFAAIDHINQHGSAHTECIVTEDSEVAETFLSQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRWILRGSGHVVDGDQGIDYTYKELPLKA* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0555 756 Pfam Amino acid kinase family 54 299 IPR001048 -
Gso3g0555 756 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 551 697 IPR016163 GO:0016620
Gso3g0555 756 PIRSF P5C_synthetase 5 756 IPR005766 GO:0003824|GO:0006561
Gso3g0555 756 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 342 737 IPR016162 GO:0016491
Gso3g0555 756 PRINTS Glutamate 5-kinase family signature 91 105 IPR001057 GO:0005524|GO:0016301
Gso3g0555 756 PRINTS Glutamate 5-kinase family signature 135 163 IPR001057 GO:0005524|GO:0016301
Gso3g0555 756 PRINTS Glutamate 5-kinase family signature 175 196 IPR001057 GO:0005524|GO:0016301
Gso3g0555 756 PRINTS Glutamate 5-kinase family signature 214 241 IPR001057 GO:0005524|GO:0016301
Gso3g0555 756 PRINTS Glutamate 5-kinase family signature 273 293 IPR001057 GO:0005524|GO:0016301
Gso3g0555 756 ProSitePatterns Glutamate 5-kinase signature. 271 288 IPR019797 GO:0004349|GO:0006561
Gso3g0555 756 TIGRFAM proA: glutamate-5-semialdehyde dehydrogenase 341 728 IPR000965 GO:0004350|GO:0006561
Gso3g0555 756 SUPERFAMILY ALDH-like 334 738 IPR016161 GO:0016491
Gso3g0555 756 Gene3D - 45 326 IPR036393 -
Gso3g0555 756 TIGRFAM proB: glutamate 5-kinase 54 328 IPR005715 GO:0005737|GO:0006561
Gso3g0555 756 Hamap Glutamate 5-kinase [proB]. 54 323 IPR005715 GO:0005737|GO:0006561
Gso3g0555 756 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 22 756 - -
Gso3g0555 756 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE SYNTHASE 22 756 - -
Gso3g0555 756 CDD ALDH_F18-19_ProA-GPR 335 735 IPR000965 GO:0004350|GO:0006561
Gso3g0555 756 CDD AAK_P5CS_ProBA 46 320 IPR041744 -
Gso3g0555 756 Pfam Aldehyde dehydrogenase family 329 595 IPR015590 GO:0016491
Gso3g0555 756 SUPERFAMILY Carbamate kinase-like 54 319 IPR036393 -
Gso3g0555 756 TIGRFAM P5CS: delta l-pyrroline-5-carboxylate synthetase 47 755 IPR005766 GO:0003824|GO:0006561
Gso3g0555 756 Hamap Gamma-glutamyl phosphate reductase [proA]. 333 739 IPR000965 GO:0004350|GO:0006561
Gso3g0555 756 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 646 667 IPR020593 GO:0004350|GO:0006561
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0555 Gso-Chr3 14378170 14390552 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0555 K12657 - gmx:100797414 1413.28